DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and GAD1

DIOPT Version :10

Sequence 1:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_013976.1 Gene:GAD1 / 855291 SGDID:S000004862 Length:585 Species:Saccharomyces cerevisiae


Alignment Length:517 Identity:97/517 - (18%)
Similarity:181/517 - (35%) Gaps:138/517 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KVIDVLLDFVKATNDRNEKVLDFHHPEDMKRLLD---------LDVPDRALPLQ---QLIEDCAT 91
            ||:..|......:||..:..:...| :....:.|         ..||.:.||..   |||.:..|
Yeast    18 KVVHDLAGLQLLSNDVQKSAVQSGH-QGSNNMRDTSSQGMANKYSVPKKGLPADLSYQLIHNELT 81

  Fly    92 TLKYQVKTGHPHFFNQLSNGLDLISMAGEWLTATA--------NTNMFTYEIAPVFILMENVVLT 148
            .      .|:||        |:|.|....:.|..|        ..|:...:..|..|.:....::
Yeast    82 L------DGNPH--------LNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCIS 132

  Fly   149 KMREIIGW-------------SGGDSILAPGGSISNLYAFLAARHKMFPNYKEHGSVGLPGTLVM 200
            .:.::  |             :|....:..||        ||.:.:.....|..|.......::|
Yeast   133 MLAQL--WHANPDEEPIGCATTGSSEAIMLGG--------LAMKKRWEHRMKNAGKDASKPNIIM 187

  Fly   201 FTSDQCHYSIKSCAAVCGLGTDHCIVVP-SDEHGKMITSELERLILERKAKGDIPFFVNATAGTT 264
              |..|..:::.......:   .|.:|| |.....|:..|   .:.:...:..|..||  ..|||
Yeast   188 --SSACQVALEKFTRYFEV---ECRLVPVSHRSHHMLDPE---SLWDYVDENTIGCFV--ILGTT 242

  Fly   265 VLGAFDDINTIADICQ----KYNCW------MHIDAAWGGGLL-MSRKHRHPRFTGVE------- 311
            ..|..:::..:||:..    |:..|      :|.|.|.||.:: ...:..|.:..|:|       
Yeast   243 YTGHLENVEKVADVLSQIEAKHPDWSNTDIPIHADGASGGFIIPFGFEKEHMKAYGMERWGFNHP 307

  Fly   312 RADSVTWNPHKL------MGALLQCSTIHFKEDGLLISCNQMSAEYLFMTDKQYDISYD-TGDKV 369
            |..|:..:.||.      :|.:|      ::::.||....:...:||...::.:.:::. .|.:|
Yeast   308 RVVSMNTSGHKFGLTTPGLGWVL------WRDESLLADELRFKLKYLGGVEETFGLNFSRPGFQV 366

  Fly   370 IQCGRHNDIFKLWLQWRAKGTEGFEQQ-QDRLMELVQYQLKRIR--------EQSDRFHLILE-- 423
            :    |.     :..:.:.|..|:..| |:.|.....:..:.:.        |.....|..:|  
Yeast   367 V----HQ-----YFNFVSLGHSGYRTQFQNSLFVARAFSFELLNSSKLPGCFEIVSSIHESIEND 422

  Fly   424 --PECVNVSFWYVPKRLR-GVP----------HDAKKEVELGKICPIIKGRMMQKGTLMVGY 472
              |:.|. .:|..|:..: |||          |:...||....:..:::||    |.::..|
Yeast   423 SAPKSVK-DYWEHPQAYKPGVPLVAFKLSKKFHEEYPEVPQAILSSLLRGR----GWIIPNY 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 80/441 (18%)
GAD1NP_013976.1 Glu-decarb-GAD 41..522 CDD:130848 92/494 (19%)

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