DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and gadl1

DIOPT Version :10

Sequence 1:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_012820293.1 Gene:gadl1 / 733871 XenbaseID:XB-GENE-5721903 Length:522 Species:Xenopus tropicalis


Alignment Length:520 Identity:234/520 - (45%)
Similarity:327/520 - (62%) Gaps:19/520 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLNPNGYKLSERTGKLTAYDLMPTTVTAGP-----ETREFLLKVIDVLL-DFVKATNDRNEKVL 59
            |.::.|  |...|..|..|. |:...|..||     ...:|:..|..:|: :.|...:|.|:||.
 Frog    12 MEVDKN--KQETRPMKRNAV-LVDGVVLNGPIIDSSSGEKFVEDVYRILMNELVYKASDINQKVC 73

  Fly    60 DFHHPEDMKRLLDLDVPDRALPLQQLIEDCATTLKYQVKTGHPHFFNQLSNGLDLISMAGEWLTA 124
            ::..||.:|:||||::.|...|.::|::.|...:||.|||.||.|||||..|:|..|:|..::|.
 Frog    74 EWQEPEQLKKLLDLNIKDNGEPHEKLLQLCKNVIKYSVKTSHPRFFNQLYAGMDHYSLAARFITE 138

  Fly   125 TANTNMFTYEIAPVFILMENVVLTKMREIIGWSGGDSILAPGGSISNLYAFLAARHKMFPNYKEH 189
            ..|.:::|||::|||||.|..:|.||.|.:||..||.|.:||||:||:||...||:|..|:.|:.
 Frog   139 ALNPSVYTYEVSPVFILTEEAILKKMIEFLGWKEGDGIFSPGGSVSNMYAVNLARYKYCPDIKQK 203

  Fly   190 GSVGLPGTLVMFTSDQCHYSIKSCAAVCGLGTDHCIVVPSDEHGKMITSELERLILERKAKGDIP 254
            |....| .||||||::||||:|..||..|:||::...|.:|:.||||..|||..|...|.:..:|
 Frog   204 GLSSAP-RLVMFTSEECHYSMKKAAAFLGIGTENVYFVKTDDRGKMIPEELENQIQRAKKEAAVP 267

  Fly   255 FFVNATAGTTVLGAFDDINTIADICQKYNCWMHIDAAWGGGLLMSRKHR---HPRFTGVERADSV 316
            |.|:||:|||||||||.::.||:||:|:..|.|:||:|||..|||:|:|   |    |:.|||||
 Frog   268 FLVSATSGTTVLGAFDPLDDIANICEKHKLWFHVDASWGGSALMSQKYRKCLH----GIHRADSV 328

  Fly   317 TWNPHKLMGALLQCSTIHFKED-GLLISCNQMSAEYLFMTDKQYDISYDTGDKVIQCGRHNDIFK 380
            .|||||::.|.:||..:..::: |||..|:...|.|||..||.||:.||||||.|||.|..|.||
 Frog   329 AWNPHKMLMAGIQCCALLVRDNSGLLKRCHSAEATYLFQQDKFYDVQYDTGDKSIQCSRRADAFK 393

  Fly   381 LWLQWRAKGTEGFEQQQDRLMELVQYQLKRIREQSDRFHLILEPECVNVSFWYVPKRLRGVPHDA 445
            .|:.|:|.||.|.|::.:|.:.|.:|....|::: |.|.|:.|||..|..|||:|...|.:....
 Frog   394 FWMMWKALGTTGLEERINRALALTRYLASEIKKR-DGFELLWEPEYANTCFWYIPPSFRNMEKGP 457

  Fly   446 KKEVELGKICPIIKGRMMQKGTLMVGYQPDDRRPNFFRSIISSAAVNEADVDFMLDEIHRLGDDL 510
            :...:...:.|.||.|||:||::||||||...:.||||.|:.|..|:..|:||:||||.|||.||
 Frog   458 EYWRKFSNVAPTIKERMMKKGSMMVGYQPHRDKVNFFRHIVISPQVSREDMDFVLDEIERLGRDL 522

  Fly   511  510
             Frog   523  522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 180/373 (48%)
gadl1XP_012820293.1 GadA 76..521 CDD:439846 214/450 (48%)

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