DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and sepsecs

DIOPT Version :9

Sequence 1:NP_001261396.1 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_956448.1 Gene:sepsecs / 393123 ZFINID:ZDB-GENE-040426-859 Length:490 Species:Danio rerio


Alignment Length:327 Identity:70/327 - (21%)
Similarity:107/327 - (32%) Gaps:121/327 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VPDRALPLQQLIEDCATTLKYQVKTGHPHFFN-----QLSNGLDLISM----------------- 117
            ||||   |::|...||   |:.:    ||..|     |.|..:.||..                 
Zfish   231 VPDR---LEELSVLCA---KHDI----PHIVNNAYGVQPSKCMHLIQQGARVGRIDAFVQSLDKN 285

  Fly   118 ----AGEWLTATANTNMFTYEIAPVF-----------ILMENVVLTKMREIIGWSGGDSILAPG- 166
                .|..:.|..:.| |..||:.::           :|:  .:||     :|.:|...:||.. 
Zfish   286 FVVPVGGAIIAGFDEN-FIQEISKIYPGRASASPSLDVLI--TLLT-----LGANGYKKLLADRK 342

  Fly   167 ---GSISNLYAFLAARHKMFPNYKEHGSVGLPGTLVMFTSDQCHYSIKSCAAVCGLGTDHCIVVP 228
               |.::...:.|||||........|..:.|..:|       .|....|.:||..||:       
Zfish   343 ELYGHLAQELSALAARHGERLLKTPHNPISLAMSL-------NHLEAHSSSAVTQLGS------- 393

  Fly   229 SDEHGKMITSELERLILERKAKGD--IPFFVNAT-AGTTVLGAFDDINTIADICQKYNCWMHIDA 290
                          ::..|:..|.  :|..|..| :|.|..|....       .:.|.| .:::|
Zfish   394 --------------MLFTRQVSGARVVPLGVQQTVSGHTFSGFMSH-------SEAYPC-PYLNA 436

  Fly   291 AWGGGL-------LMSRKHRHPRFTGVERADSVTWNPHKLMGALLQCSTIHFKEDGLLISCNQMS 348
            |...|:       .|.|..:..:....|::|     |..|..           |||.|....|.|
Zfish   437 ASAIGITKGDVTVCMKRLGKCLKILKKEKSD-----PADLEA-----------EDGELEESPQRS 485

  Fly   349 AE 350
            .|
Zfish   486 TE 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_001261396.1 Pyridoxal_deC 64..434 CDD:395219 70/327 (21%)
sepsecsNP_956448.1 Tetramerization. /evidence=ECO:0000250|UniProtKB:Q9HD40 1..44
selenium_SpcS 12..458 CDD:211833 59/280 (21%)
Phosphate loop (P-loop). /evidence=ECO:0000250|UniProtKB:Q9HD40 96..106
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..490 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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