DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gad1 and GADL1

DIOPT Version :9

Sequence 1:NP_001261396.1 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_997242.2 Gene:GADL1 / 339896 HGNCID:27949 Length:521 Species:Homo sapiens


Alignment Length:516 Identity:232/516 - (44%)
Similarity:328/516 - (63%) Gaps:27/516 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GKLTAYDLMPT---------TVTAGPET-----REFLLKVIDVLLDFV--KATNDRNEKVLDFHH 63
            |.:...:::|:         .|..||.|     .:|:.:...::::.|  ||| |.||||.::..
Human    13 GDIDQQEMIPSKKNAVLVDGVVLNGPTTDAKAGEKFVEEACRLIMEEVVLKAT-DVNEKVCEWRP 76

  Fly    64 PEDMKRLLDLDVPDRALPLQQLIEDCATTLKYQVKTGHPHFFNQLSNGLDLISMAGEWLTATANT 128
            ||.:|:||||::.|...|..:|:|.|...:.|.|||.||.|||||..|||..|:...::|...|.
Human    77 PEQLKQLLDLEMRDSGEPPHKLLELCRDVIHYSVKTNHPRFFNQLYAGLDYYSLVARFMTEALNP 141

  Fly   129 NMFTYEIAPVFILMENVVLTKMREIIGWSGGDSILAPGGSISNLYAFLAARHKMFPNYKEHGSVG 193
            :::|||::|||:|:|..||.||.|.|||..||.|..||||:||:||...||:|..|:.||.|..|
Human   142 SVYTYEVSPVFLLVEEAVLKKMIEFIGWKEGDGIFNPGGSVSNMYAMNLARYKYCPDIKEKGLSG 206

  Fly   194 LPGTLVMFTSDQCHYSIKSCAAVCGLGTDHCIVVPSDEHGKMITSELERLILERKAKGDIPFFVN 258
            .| .|::|||.:||||:|..|:..|:||::...|.:|..||||..|||:.:.:.:.:|..||.|.
Human   207 SP-RLILFTSAECHYSMKKAASFLGIGTENVCFVETDGRGKMIPEELEKQVWQARKEGAAPFLVC 270

  Fly   259 ATAGTTVLGAFDDINTIADICQKYNCWMHIDAAWGGGLLMSRKHR---HPRFTGVERADSVTWNP 320
            ||:|||||||||.::.|||||::::.|:|:||:|||..|||||||   |    |:.|||||.|||
Human   271 ATSGTTVLGAFDPLDEIADICERHSLWLHVDASWGGSALMSRKHRKLLH----GIHRADSVAWNP 331

  Fly   321 HKLMGALLQCSTIHFKE-DGLLISCNQMSAEYLFMTDKQYDISYDTGDKVIQCGRHNDIFKLWLQ 384
            ||::.|.:||..:..|: ..||..|....|.|||..||.||:|||||||.|||.|..|.||.|:.
Human   332 HKMLMAGIQCCALLVKDKSDLLKKCYSAKASYLFQQDKFYDVSYDTGDKSIQCSRRPDAFKFWMT 396

  Fly   385 WRAKGTEGFEQQQDRLMELVQYQLKRIREQSDRFHLILEPECVNVSFWYVPKRLRGVPHDAKKEV 449
            |:|.||.|.|::.:|.:.|.:|.:..|::: :.|.|::|||..|:.|||:|..||.:....:...
Human   397 WKALGTLGLEERVNRALALSRYLVDEIKKR-EGFKLLMEPEYANICFWYIPPSLREMEEGPEFWA 460

  Fly   450 ELGKICPIIKGRMMQKGTLMVGYQPDDRRPNFFRSIISSAAVNEADVDFMLDEIHRLGDDL 510
            :|..:.|.||.|||:||:||:||||...:.||||.::.|..|:..|:||:||||..||.|:
Human   461 KLNLVAPAIKERMMKKGSLMLGYQPHRGKVNFFRQVVISPQVSREDMDFLLDEIDLLGKDM 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_001261396.1 Pyridoxal_deC 64..434 CDD:395219 181/373 (49%)
GADL1NP_997242.2 AAT_I 77..445 CDD:302748 181/373 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62386
OrthoDB 1 1.010 - - D162307at33208
OrthoFinder 1 1.000 - - FOG0000667
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100596
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X464
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.730

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