DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and CG1486

DIOPT Version :10

Sequence 1:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_608450.1 Gene:CG1486 / 33108 FlyBaseID:FBgn0031174 Length:852 Species:Drosophila melanogaster


Alignment Length:587 Identity:113/587 - (19%)
Similarity:201/587 - (34%) Gaps:194/587 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NPNGYKLSERTG-KLTAYDLMPTTVTAGPETREFLLKVIDVLLDFVKATNDRNEKVLDFHHPEDM 67
            :||..:..|..| ::|:.||:|    |.......:||.::.|:.:..:.:|          ||..
  Fly    67 SPNPVENEEEAGERVTSEDLLP----AKHRVPSDILKSLEQLVSYTDSDDD----------PEFP 117

  Fly    68 KRLLDLDVPDRALPLQQLIEDCATTLKYQVKTGHPHFFNQLSNGLDLISMAGE---WLTATANTN 129
            ...|| ||...||....::...:...:.|:.        :::|     |::|:   ||....:  
  Fly   118 LPALD-DVSHLALISHSIVAYLSHLDRQQLL--------RVTN-----SISGDATRWLGTLFH-- 166

  Fly   130 MFTYEIAPVFILMENVVLTKMREIIGWSGGDSILAPGGSISNLYAFLAARHKMFPNYKEHGSVGL 194
             |.:..:.......:.||..:|           ||           :.||   .|.|.|.|...|
  Fly   167 -FAHPASSFHADNADAVLRTVR-----------LA-----------IVAR---CPGYLEGGIPAL 205

  Fly   195 PGTLVMFTSD----QCHYSIKSCAAVCGLGTDHCIVVPSDEHGKMITSELERLILERKAKGDI-- 253
            .......:.:    :.||:.:.    .|:..:...|:|  ||.:..|.::  .:|:::.:.|:  
  Fly   206 AQPTFYISENTTPMRLHYACRQ----LGIPLEAIKVIP--EHSQSGTMDV--TLLQKQIQQDVGN 262

  Fly   254 ---PFFVNATAGTTVLGAFDDINTIADICQKYNCWMHIDAAWGGGLLMSRKHRHPRFTGVERADS 315
               |..|.|..|.::.|..|::..:.|:|:.:|.|:|........|:.::...|..    |...|
  Fly   263 NRTPLLVVADIGASLCGYVDNLLRLRDVCKAHNMWLHASGHGLAALVCAQNQGHVE----EVLHS 323

  Fly   316 VTWN----------PHKLMGALLQCSTIH-FKEDGLLI-SCNQMS-------------AEYLFMT 355
            :..|          |..|:...||.|.:. |:.|.:|. ..|.:|             ||.|.:.
  Fly   324 MALNLGSWLGVPSLPIVLLHRPLQNSALSAFESDPILSRRLNALSLWTSLQALGRKAIAERLHVA 388

  Fly   356 DKQYDISYDTGDKV-----------IQCGRH-NDIFKLWLQWRAKGTEGFEQQQ--DRLMELVQY 406
            .:...|.::...|.           .|.|.. :|:.:          ..|:.|.  |....:|.|
  Fly   389 FQTCSILFEIASKCEGIRVLSHTPGAQTGASLSDVIQ----------SPFDVQALFDAAAPVVAY 443

  Fly   407 Q-------------------------------LKRIREQS--DRFH----LILEPECVNVSFWYV 434
            |                               |::|...|  ||.:    .||:.:|.|..|..:
  Fly   444 QFDGSTTIPLGGSGSSAAAAAAERETAEGLKPLEKINNASYFDRLNSWLGQILQRDCPNFDFEVI 508

  Fly   435 PKRLRGVPHDAKKEVELGKICPIIKGRMMQKGTLMVGYQP--DDRRPNFFRSIISSAAVNEADVD 497
            .....|         ...:.||:..|         :|.||  .:...:|.:|:       ||.||
  Fly   509 EHPTHG---------SCIRYCPLELG---------LGEQPPSSENLESFAQSL-------EAHVD 548

  Fly   498 FM 499
            .:
  Fly   549 IL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 87/457 (19%)
CG1486NP_608450.1 GadA <157..410 CDD:439846 56/292 (19%)

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