DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and HDC

DIOPT Version :10

Sequence 1:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_016877583.1 Gene:HDC / 3067 HGNCID:4855 Length:697 Species:Homo sapiens


Alignment Length:468 Identity:104/468 - (22%)
Similarity:178/468 - (38%) Gaps:91/468 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ETREFLLKVIDVLLDFVKATNDRNEKVLDFHHPEDMKRLLDLDVPDRALPLQQLIEDCATTLKYQ 96
            |.||...:::|.:..::....:|  :|.....|..::..|....|:.......:..|....:...
Human     6 EYRERGREMVDYICQYLSTVRER--RVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPG 68

  Fly    97 V---KTGHPH-FFNQLSNGLDLISMAGEWLTATANTNMFTYEIAPVFILMENVVLTKMREIIGW- 156
            |   ::.|.| ::..|::...|:   |:.|....|...||:..:|....:|..|:..:.:::|. 
Human    69 VVHWQSPHMHAYYPALTSWPSLL---GDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLP 130

  Fly   157 ---------SGGDSILAPGGSISNLYAFLAARH----KMFPNYKEHGSVGLPGTLVMFTSDQCHY 208
                     |.|..:|....|.|.|.|.||||.    :|..:..:.....|...||.:.|||.|.
Human   131 EHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHS 195

  Fly   209 SIKSCAAVCGLGTDHCIV----VPSDEHGKMITSELERLILERKAKGDIPFFVNATAGTTVLGAF 269
            |::....:       .:|    :|.|::..:....|::.|.|.|.:|.:|.||.||.|||.:.||
Human   196 SVEKAGLI-------SLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAF 253

  Fly   270 DDINTIADICQKYN----------C-------------------------WMHIDAAWGGGLLMS 299
            |.::.:..|.:.::          |                         |:|||||:.|...:.
Human   254 DCLSELGPISKAHHPCSPPLSLARCETSFPTSYLPSGQVMFASSGAREGLWLHIDAAYAGTAFLC 318

  Fly   300 RKHRHPRF----TGVERADSVTWNPHKLMGALLQCSTIHFKEDGLLISCNQMSAEYLFMTDKQYD 360
                 |.|    .|:|.|||.|:||.|.|.....|:....|:...|  ....|...:::......
Human   319 -----PEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKL--QQTFSVNPIYLRHANSG 376

  Fly   361 ISYDTGDKVIQCGRHNDIFKLWLQWRAKGTEGFEQQQDRLMELVQYQLKRIR-----EQSDRFHL 420
            ::.|.....|...|.....|||...|:.|.:..:.......|:.:|....:|     |...:.||
Human   377 VATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHL 441

  Fly   421 ------ILEPECV 427
                  :..|.|:
Human   442 GLVVFRLKGPNCL 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 98/436 (22%)
HDCXP_016877583.1 Pyridoxal_deC 36..449 CDD:395219 96/429 (22%)

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