DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and Ddc

DIOPT Version :10

Sequence 1:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_063128928.1 Gene:Ddc / 24311 RGDID:2494 Length:532 Species:Rattus norvegicus


Alignment Length:525 Identity:129/525 - (24%)
Similarity:202/525 - (38%) Gaps:78/525 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ETREFLLK---VIDVLLDFVKATNDRNEKVLDFHHPEDMKRLLDLDVPDRALPLQQLIEDCATTL 93
            ::|||..:   ::|.:.|::.....|  .|.....|..::.|:....|......:.:|.|....:
  Rat    34 DSREFRRRGKEMVDYIADYLDGIEGR--PVYPDVEPGYLRALIPTTAPQEPETYEDIIRDIEKII 96

  Fly    94 KYQVKTGH-PHFFNQLSNGLDLISMAGEWLTATANTNMFTYEIAPVFILMENVV---LTKMRE-- 152
            ...|...| |:||..........:|..:.|........|::..:|....:|.|:   |.||.|  
  Rat    97 MPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELP 161

  Fly   153 ---IIGWSG-GDSILAPGGSISNLYAFLAARHKMFPNYK----EHGSVGLPGTLVMFTSDQCHYS 209
               :.|.:| |..::....|.:.|.|.||||.||....:    |.....|...||.:||||.|.|
  Rat   162 EAFLAGRAGEGGGVIQGSASEATLVALLAARTKMIRQLQAASPELTQAALMEKLVAYTSDQAHSS 226

  Fly   210 IKSCAAVCGLGTDHCIVVPSDEHGKMITSELERLILERKAKGDIPFFVNATAGTTVLGAFDDINT 274
            ::....:.|:...   .:|||.:..|..:.|...:...||.|.|||||..|.|||...:||::..
  Rat   227 VERAGLIGGVKIK---AIPSDGNYSMRAAALREALERDKAAGLIPFFVVVTLGTTSCCSFDNLLE 288

  Fly   275 IADICQKYNCWMHIDAAWGGGLLMSRKHRHPRFTGVERADSVTWNPHKLMGALLQCSTI------ 333
            :..||.:...|:|||||:.|...:..:.|: ...|||.|||..:||||.:.....||.:      
  Rat   289 VGPICNQEGVWLHIDAAYAGSAFICPEFRY-LLNGVEFADSFNFNPHKWLLVNFDCSAMCDVFCP 352

  Fly   334 --------------HFKEDGLLISCNQMSAEYLFMTDKQYDISYDTGDKVIQCGRHNDIFKLWLQ 384
                          ..|:...|.....|...||..:.:...:..|.....|..||.....|:|..
  Rat   353 GKIKQNPRQSVRRSRVKKRTDLTEAFNMDPVYLRHSHQDSGLITDYRHWQIPLGRRFRSLKMWFV 417

  Fly   385 WRAKGTEGFEQQQDRLMELVQYQLKRIREQSDRFHLILEPECVNVSFWYVPKRLRGVPHDAKKEV 449
            :|..|.:|.:....:.::| .::.:.:..|..||.:     |.                    ||
  Rat   418 FRMYGVKGLQAYIRKHVKL-SHEFESLVRQDPRFEI-----CT--------------------EV 456

  Fly   450 ELGKICPIIKGRMMQKGTLM--------VGYQPDDRRPNF-FRSIISSAAVNEADVDFMLDEIHR 505
            .||.:|..:||......||:        :...|...|..| .|..:.|..|..|.|....:.|..
  Rat   457 ILGLVCFRLKGSNQLNETLLQRINSAKKIHLVPCRLRDKFVLRFAVCSRTVESAHVQLAWEHIRD 521

  Fly   506 LGDDL 510
            |...:
  Rat   522 LASSV 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 103/403 (26%)
DdcXP_063128928.1 None

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