DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and spl-1

DIOPT Version :9

Sequence 1:NP_001261396.1 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_499913.1 Gene:spl-1 / 176857 WormBaseID:WBGene00004981 Length:552 Species:Caenorhabditis elegans


Alignment Length:308 Identity:70/308 - (22%)
Similarity:118/308 - (38%) Gaps:59/308 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LLDFVKATNDRNEKVLDFHHPEDMKRLLDLDVPDR----ALPLQQLIEDCATTL--KYQVKTGHP 102
            ||..:.|..|:.||.|....|: :...:..|..|:    .||:..|.:|....|  ||:    ..
 Worm    70 LLRKLPAVRDKIEKELAAEKPK-LIESIHKDDKDKQFISTLPIAPLSQDSIMELAKKYE----DY 129

  Fly   103 HFFN----QLSNGL------DLISMAGEWLTATANTNMFTYEIAPVFILMENVVLTKMREII-GW 156
            :.||    ::|..:      :.|::.|:.....|.:|....::.|....||..::..:..:. |.
 Worm   130 NTFNIDGGRVSGAVYTDRHAEHINLLGKIYEKYAFSNPLHPDVFPGARKMEAELIRMVLNLYNGP 194

  Fly   157 SGGDSILAPGGSISNLYAFLAARHKMFPNYKEHGSVGLPGTLVMFTSDQCHYSIKSCAAVCGLGT 221
            ......:..||:.|.:.|..:.|::......||.        |:......|.:....|.:||:..
 Worm   195 EDSSGSVTSGGTESIIMACFSYRNRAHSLGIEHP--------VILACKTAHAAFDKAAHLCGMRL 251

  Fly   222 DHCIVVPSDEHGKMITSELERLILERKAK--GDIPFFVNATAGTTVLGAFDDINTIADICQKYNC 284
            .|   ||.|...::...|:||||......  |..|.|.:        |..|.|..||.:.:||..
 Worm   252 RH---VPVDSDNRVDLKEMERLIDSNVCMLVGSAPNFPS--------GTIDPIPEIAKLGKKYGI 305

  Fly   285 WMHIDAAWGGGLLMSRK----------HRHPRFTGVERADSVTWNPHK 322
            .:|:||..||.::....          .|:|..|      |::.:.||
 Worm   306 PVHVDACLGGFMIPFMNDAGYLIPVFDFRNPGVT------SISCDTHK 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_001261396.1 Pyridoxal_deC 64..434 CDD:395219 63/288 (22%)
spl-1NP_499913.1 DOPA_deC_like 138..501 CDD:99743 51/235 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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