DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and Hdc

DIOPT Version :10

Sequence 1:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_006498847.1 Gene:Hdc / 15186 MGIID:96062 Length:681 Species:Mus musculus


Alignment Length:454 Identity:108/454 - (23%)
Similarity:183/454 - (40%) Gaps:73/454 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LMPTTVTAGPETREFLL---KVIDVLLDFVKATNDRNEKVLDFHHPEDMKRLLDLDVPDRALPLQ 83
            |..||:    ..|.|:|   :::|.:..::....:|  :|.....|..::..|....|:......
Mouse    23 LSTTTL----RVRCFILSGKEMVDYISQYLSTVRER--QVTPNVQPGYLRAQLPASAPEEPDSWD 81

  Fly    84 QLIEDCATTLKYQV---KTGHPH-FFNQLSNGLDLISMAGEWLTATANTNMFTYEIAPVFILMEN 144
            .:..|....:...|   ::.|.| ::..|::...|:   |:.|....|...||:..:|....:|.
Mouse    82 SIFGDIERVIMPGVVHWQSPHMHAYYPALTSWPSLL---GDMLADAINCLGFTWASSPACTELEM 143

  Fly   145 VVLTKMREIIGW----------SGGDSILAPGGSISNLYAFLAARHKMF-------PNYKEHGSV 192
            .::..:.:::|.          |.|..:|....|.|.|.|.||||....       |:..|.   
Mouse   144 NIMDWLAKMLGLPEYFLHHHPSSRGGGVLQSTVSESTLIALLAARKNKILAMKACEPDANES--- 205

  Fly   193 GLPGTLVMFTSDQCHYSIKSCAAVCGLGTDHCIV----VPSDEHGKMITSELERLILERKAKGDI 253
            .|...||.:||||.|.|::....:       .:|    :|.|::..:....|::.|.|.|.:|.:
Mouse   206 SLNARLVAYTSDQAHSSVEKAGLI-------SLVKIRFLPVDDNFSLRGEALQKAIEEDKQQGLV 263

  Fly   254 PFFVNATAGTTVLGAFDDINTIADICQKYNCWMHIDAAWGGGLLMSRKHRHPRFTGVERADSVTW 318
            |.||.||.|||.:.|||.::.:..||.....|:|:|||:.|...:..:.| ....|:|.|||.|:
Mouse   264 PVFVCATLGTTGVCAFDRLSELGPICASEGLWLHVDAAYAGTAFLCPELR-GFLEGIEYADSFTF 327

  Fly   319 NPHKLMGALLQCSTIHFKEDGLLISCNQMSAEYLFMTDKQYDISYDTGDKV------IQCGRHND 377
            ||.|.|       .:||...|..:. ::...:..|..:..|....::|...      |...|...
Mouse   328 NPSKWM-------MVHFDCTGFWVK-DKYKLQQTFSVNPIYLRHANSGAATDFMHWQIPLSRRFR 384

  Fly   378 IFKLWLQWRAKGTEGFEQQQDRLMELVQYQLKRIR-----EQSDRFHL------ILEPECVNVS 430
            ..|||...|:.|.:..:.......|:.:|....:|     |...:.||      :..|.|:..|
Mouse   385 SIKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRSDPSFEIPAKRHLGLVVFRLKGPNCLTES 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 99/409 (24%)
HdcXP_006498847.1 Pyridoxal_deC 62..440 CDD:395219 96/399 (24%)

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