DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gad1 and gad2

DIOPT Version :10

Sequence 1:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_017950266.1 Gene:gad2 / 100493806 XenbaseID:XB-GENE-976598 Length:588 Species:Xenopus tropicalis


Alignment Length:498 Identity:274/498 - (55%)
Similarity:358/498 - (71%) Gaps:8/498 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LTAYDLMPTTVTAGPETREFLLKVIDVLLDFVKATNDRNEKVLDFHHPEDMKRLLDLDVPDRALP 81
            |.:.||:|:....| .|..||..||||||.:|..|.||:.||:|||:|.::.:..:.::.::...
 Frog    95 LYSTDLLPSKNGEG-VTMTFLQDVIDVLLQYVVQTFDRSTKVIDFHYPNELLQAYNWELSEQPQS 158

  Fly    82 LQQLIEDCATTLKYQVKTGHPHFFNQLSNGLDLISMAGEWLTATANTNMFTYEIAPVFILMENVV 146
            |..::.:|.|||||.:|||||.:|||||.|||::.:|.:|||:|||||||||||||||:|:|.|.
 Frog   159 LDGILLNCKTTLKYAIKTGHPRYFNQLSTGLDMVGLAADWLTSTANTNMFTYEIAPVFVLLEYVT 223

  Fly   147 LTKMREIIGWSG--GDSILAPGGSISNLYAFLAARHKMFPNYKEHGSVGLPGTLVMFTSDQCHYS 209
            |.||||:|||.|  ||.|.:|||:||||||.|.||.||||..||.|...|| .||.|||:..|:|
 Frog   224 LKKMREMIGWPGGSGDGIFSPGGAISNLYAMLIARFKMFPEVKEKGMAALP-RLVAFTSEHSHFS 287

  Fly   210 IKSCAAVCGLGTDHCIVVPSDEHGKMITSELERLILERKAKGDIPFFVNATAGTTVLGAFDDINT 274
            :|..||..|:|||..|::.:||.|::|.|:|||.|:|.|..|.:||||:|||||||.||||.:.:
 Frog   288 VKKGAAALGIGTDSVILIKADERGRLIPSDLERRIIEAKQNGYVPFFVSATAGTTVYGAFDPLVS 352

  Fly   275 IADICQKYNCWMHIDAAWGGGLLMSRKHRHPRFTGVERADSVTWNPHKLMGALLQCSTIHFKEDG 339
            |||||:||..|||:||||||||||||||:. :..|.:||:||||||||:||..||||.:..:|:|
 Frog   353 IADICKKYRIWMHVDAAWGGGLLMSRKHKW-KLNGADRANSVTWNPHKMMGVPLQCSALLVREEG 416

  Fly   340 LLISCNQMSAEYLFMTDKQYDISYDTGDKVIQCGRHNDIFKLWLQWRAKGTEGFEQQQDRLMELV 404
            |:.:||||.|.|||..||.||:|||||||.:|||||.|||||||.||||||.|||...|:.:||.
 Frog   417 LMQNCNQMHASYLFQQDKHYDLSYDTGDKALQCGRHVDIFKLWLMWRAKGTTGFEAHIDKCLELS 481

  Fly   405 QYQLKRIREQSDRFHLILE--PECVNVSFWYVPKRLRGVPHDAKKEVELGKICPIIKGRMMQKGT 467
            :|...:|:.: :.:.:::|  |:..||.|||||..||.:..:.::...|.|:.||||.|||:.||
 Frog   482 EYLYNKIKNR-EGYEMVIEGKPQHTNVCFWYVPPSLRNMEDNEERMNRLSKVAPIIKARMMEYGT 545

  Fly   468 LMVGYQPDDRRPNFFRSIISSAAVNEADVDFMLDEIHRLGDDL 510
            .||.|||...:.||||.:||:.|....|:||:::||.|||.||
 Frog   546 TMVSYQPHGDKGNFFRMVISNPAAAHQDIDFLIEEIERLGQDL 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 213/373 (57%)
gad2XP_017950266.1 Pyridoxal_deC 141..512 CDD:395219 213/373 (57%)

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