DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1136 and Lcp3

DIOPT Version :9

Sequence 1:NP_647853.1 Gene:CG1136 / 38479 FlyBaseID:FBgn0035490 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001260803.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster


Alignment Length:81 Identity:19/81 - (23%)
Similarity:33/81 - (40%) Gaps:3/81 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLALVALAAVVTGSQTPSANQYHIQTDEGPERYF-RFQTDSGQFRKEKRLQDGTVIGTEAWIDAA 68
            :|.:.:|||:|..:......:  :..|..|:.:. :...|.|..........|.:.|...||...
  Fly     4 ILLVCSLAALVAANANVEVKE--LVNDVQPDGFVSKLVLDDGSASSATGDIHGNIDGVFEWISPE 66

  Fly    69 GYLRQKDYIADKQGYR 84
            |...:..|.||:.||:
  Fly    67 GVHVRVSYKADENGYQ 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1136NP_647853.1 None
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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