DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1136 and Lcp1

DIOPT Version :9

Sequence 1:NP_647853.1 Gene:CG1136 / 38479 FlyBaseID:FBgn0035490 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:113 Identity:29/113 - (25%)
Similarity:40/113 - (35%) Gaps:31/113 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 PPLPSSSYRRRLRPRPVQGNHLDGLAASE------YDGVGVTRNGFRYVLPKQYHEEETNPSDGK 404
            ||:|.|..|.       :..|.|.|:.|:      :|....|.||.........|        |.
  Fly    18 PPVPHSLGRS-------EDVHADVLSQSDDVRADGFDSSLHTSNGIEQAASGDAH--------GN 67

  Fly   405 RAGSFGYVDPFGIRRVVYYNAAPGRGFVHRNNNQFVGANGAPYDSPGP 452
            ..|:||::.|.|....|.|.|         |.|.: ..:||...:|.|
  Fly    68 IHGNFGWISPEGEHVEVKYVA---------NENGY-QPSGAWIPTPPP 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1136NP_647853.1 None
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 16/63 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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