DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rcd5 and mcrs1

DIOPT Version :9

Sequence 1:NP_647852.1 Gene:Rcd5 / 38478 FlyBaseID:FBgn0263832 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001016780.2 Gene:mcrs1 / 549534 XenbaseID:XB-GENE-5732599 Length:453 Species:Xenopus tropicalis


Alignment Length:494 Identity:241/494 - (48%)
Similarity:308/494 - (62%) Gaps:80/494 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KRRSSSRTIKRKRFDDEIVEYNIAVPTNR----SGTDANR--SSRPRTTSQNYPALVGVPHTTLA 147
            |||||||.||||:||||:||.::|..|:|    ||.:..|  .|.|.::.:.......:      
 Frog    34 KRRSSSRFIKRKKFDDELVESSLAKSTSRARGPSGGEPGRYSGSEPSSSEKKKQVCKAI------ 92

  Fly   148 PLNIPTSTPQTPLSVDSLLPGTPSTVASLSLATPTTPAPLATPLPVAPIVTAVAHPKPPAMERST 212
                                              |||||   |.| ||                 
 Frog    93 ----------------------------------TTPAP---PSP-AP----------------- 102

  Fly   213 TSERRSRPVRPASKKAQRRNGRPMGQMATKDLGRWKPIDDLALIIGIQQTNDLRIIHRGVKFSCK 277
                     .|:..|..:::.:|:  ..|||||||||.|||.||..:.|||||..:|.||||||:
 Frog   103 ---------SPSIAKRIKKSKQPL--QVTKDLGRWKPADDLLLINTVLQTNDLHAVHLGVKFSCR 156

  Fly   278 FTLQELQQRWYALLYEPAVSRIAVSAIRNLHPELVESVQRKALYSVQEEDLLGTIKSSEQPKLEQ 342
            |||.|:|:|||||||:|.:|::|..|||.||||::.::|.:.|:|..||.||.|:.|:.||.|:.
 Frog   157 FTLNEIQERWYALLYDPVISKLACQAIRQLHPEVIAAIQSRVLFSKAEEQLLSTVSSASQPTLDT 221

  Fly   343 FQELLDKNASVFYCARTAKSLQNHWLLLKQYTLLPDQSVKPIYGTDQQPLSFSDAEDQIFEHDLN 407
            ||:||:|:..|||.:|||||||.||.|:|||.||.||:|:|:...| |.|:||||||.:.:..|.
 Frog   222 FQDLLNKHPEVFYMSRTAKSLQVHWQLMKQYYLLEDQTVQPLPKGD-QVLNFSDAEDMLDDSKLR 285

  Fly   408 EPRDEALEMERALADRRNKRNIRLLENELSRWAVLVDSVLSPTAASEFDNQTLACLCGRHVRYLM 472
            |.|||.||.|..:||||.||.||.||.||:||.|||||: :..::.:||.||||.|.||.|||||
 Frog   286 ETRDEVLEHELTVADRRQKREIRQLEQELNRWQVLVDSI-TGMSSPDFDTQTLAVLRGRMVRYLM 349

  Fly   473 RSKEITFGRDAKDCVVDVDLGLEGPAAKISRRQGTIKLRSNGDFFIANEGKRAIFIDGTPLLSAN 537
            ||:|||.||..||..:||||.|||||.||||:||.|||::||||||||||:|||:|||.|:|..:
 Frog   350 RSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRAIYIDGRPVLPGS 414

  Fly   538 KARLGHNCTVEISGLRFTFLVNYELINAIRQESAKTSNP 576
            |.:|.||..||||||||.||:|.:||:.|:.|:||...|
 Frog   415 KWKLSHNSVVEISGLRFVFLINQDLISLIKAEAAKVIQP 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rcd5NP_647852.1 MCRS_N 246..444 CDD:290064 115/197 (58%)
FHA 465..559 CDD:238017 66/93 (71%)
mcrs1NP_001016780.2 MCRS_N 125..322 CDD:372565 115/197 (58%)
FHA 336..436 CDD:238017 70/99 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 239 1.000 Domainoid score I2248
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4622
Inparanoid 1 1.050 420 1.000 Inparanoid score I1759
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091011at2759
OrthoFinder 1 1.000 - - FOG0005081
OrthoInspector 1 1.000 - - oto105501
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3176
SonicParanoid 1 1.000 - - X4708
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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