DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rcd5 and Mcrs1

DIOPT Version :9

Sequence 1:NP_647852.1 Gene:Rcd5 / 38478 FlyBaseID:FBgn0263832 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_001013124.1 Gene:Mcrs1 / 300222 RGDID:1311607 Length:462 Species:Rattus norvegicus


Alignment Length:485 Identity:235/485 - (48%)
Similarity:302/485 - (62%) Gaps:71/485 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KRRSSSRTIKRKRFDDEIVEYNIAVPTNR-SGTDANRSSRPRTTSQNYPALVGVPHTTLAPLNIP 152
            |||||||.||||:||||:||.::|..:.| .|..:..|.|...:.                   |
  Rat    44 KRRSSSRFIKRKKFDDELVESSLAKSSTRVKGAGSVESGRCSGSE-------------------P 89

  Fly   153 TSTPQTPLSVDSLLPGTPSTVASLSLATPTTPAPLATPLPVAPIVTAVAHPKPPAMERSTTSERR 217
            :|:.:..:   |..|.||         .|.:|||                               
  Rat    90 SSSEKKKV---SKAPSTP---------VPPSPAP------------------------------- 111

  Fly   218 SRPVRPASKKAQRRNGRPMGQMATKDLGRWKPIDDLALIIGIQQTNDLRIIHRGVKFSCKFTLQE 282
                .|...|..:::.:|:  ..|||||||||.|||.||..:.|||||..:|.||||||:|||:|
  Rat   112 ----TPGLTKRVKKSKQPL--QVTKDLGRWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLRE 170

  Fly   283 LQQRWYALLYEPAVSRIAVSAIRNLHPELVESVQRKALYSVQEEDLLGTIKSSEQPKLEQFQELL 347
            :|:|||||||:|.:|::|..|:|.||||.:.::|.|||:|..||.||..:.|:.||.||.||:||
  Rat   171 VQERWYALLYDPVISKLACQAMRQLHPEAIAAIQSKALFSKAEEQLLSKVGSTSQPTLETFQDLL 235

  Fly   348 DKNASVFYCARTAKSLQNHWLLLKQYTLLPDQSVKPIYGTDQQPLSFSDAEDQIFEHDLNEPRDE 412
            .::...||.|||||:||.||.|:|||.||.||:|:|:...| |.|:||||||.|.:.:|.:.|||
  Rat   236 HRHPDAFYLARTAKALQAHWQLMKQYYLLEDQTVQPLPKGD-QVLNFSDAEDLIDDSELKDMRDE 299

  Fly   413 ALEMERALADRRNKRNIRLLENELSRWAVLVDSVLSPTAASEFDNQTLACLCGRHVRYLMRSKEI 477
            .||.|..:||||.||.||.||.||.:|.|||||: :..::.:|||||||.|.||.|||||||:||
  Rat   300 VLEHELTVADRRQKREIRQLEQELHKWQVLVDSI-TGMSSPDFDNQTLAVLRGRMVRYLMRSREI 363

  Fly   478 TFGRDAKDCVVDVDLGLEGPAAKISRRQGTIKLRSNGDFFIANEGKRAIFIDGTPLLSANKARLG 542
            |.||..||..:||||.|||||.||||:||.|||::||||||||||:|.|:|||.|:|..:|.||.
  Rat   364 TLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLS 428

  Fly   543 HNCTVEISGLRFTFLVNYELINAIRQESAK 572
            :|..|||:.|||.||:|.:||..||.|:||
  Rat   429 NNSVVEIASLRFVFLINQDLIALIRAEAAK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rcd5NP_647852.1 MCRS_N 246..444 CDD:290064 113/197 (57%)
FHA 465..559 CDD:238017 63/93 (68%)
Mcrs1NP_001013124.1 MCRS_N 134..331 CDD:290064 113/197 (57%)
FHA 345..445 CDD:238017 67/99 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335397
Domainoid 1 1.000 231 1.000 Domainoid score I2352
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4622
Inparanoid 1 1.050 398 1.000 Inparanoid score I1886
OMA 1 1.010 - - QHG48167
OrthoDB 1 1.010 - - D1091011at2759
OrthoFinder 1 1.000 - - FOG0005081
OrthoInspector 1 1.000 - - oto98807
orthoMCL 1 0.900 - - OOG6_106192
Panther 1 1.100 - - LDO PTHR13233
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4708
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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