DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11593 and Arhgap17

DIOPT Version :10

Sequence 1:NP_647851.3 Gene:CG11593 / 38477 FlyBaseID:FBgn0035488 Length:484 Species:Drosophila melanogaster
Sequence 2:XP_038945137.1 Gene:Arhgap17 / 63994 RGDID:628767 Length:866 Species:Rattus norvegicus


Alignment Length:273 Identity:48/273 - (17%)
Similarity:81/273 - (29%) Gaps:82/273 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ESSPSESKMDISETPTDSTGVSPLADDVLPTAPEKNILKLEQAKQDHDKEELEFKTTSALDNRIL 73
            :|||             .||.||......|:.|::...:.:|.:|...:::.:            
  Rat   654 QSSP-------------GTGTSPKPSTRSPSPPQQQQQQQQQQQQQQQQQQQQ------------ 693

  Fly    74 RPELLPMEAMPQRHNIIERTLANSHPLMSPTNTDSDSEPFQLKKQEKQLPRSNFPDVVPT----- 133
                 ..:...|:.....|..::|.|.:...|......|.|.:..|:.......|...||     
  Rat   694 -----QQQQQQQQQTPGMRRCSSSLPPIQAPNHPPPQPPTQPRLGEQGPEPGPTPPQTPTPPSTP 753

  Fly   134 ---------TETVQVKNNLNQCRNKPQDAKVSLLRANSPDILSSESDADVSQYLAAVESNFQSVS 189
                     :||.|:...|.:.|..|:.       .|.|                       ||.
  Rat   754 PPAKQNSSQSETTQLHGTLPRPRPVPKP-------RNRP-----------------------SVP 788

  Fly   190 LMPNGNGKKSKRSTALPGGEDISSL--DSISNHSFDDDEDIEHNLASLSP------SSSLIDGLD 246
            ..||..|.........|.....|.:  |::.....|.:..:..:|.::.|      :|..:.|..
  Rat   789 PPPNPPGTHMGDGGLTPSVPTASRIVTDALPGALTDTNSRVSESLRNIFPEIHSDLASKEVPGHI 853

  Fly   247 GEDDDDDCEGPEL 259
            ..|.|:|.|...|
  Rat   854 LLDIDNDTESTAL 866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11593NP_647851.3 BNIP2 <293..342 CDD:463609
CRAL_TRIO_2 345..475 CDD:463965
Arhgap17XP_038945137.1 BAR_Rich1 13..257 CDD:153302
RhoGAP_nadrin 246..446 CDD:239851
Blue background indicates that the domain is not in the aligned region.

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