DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11593 and arhgap17a

DIOPT Version :10

Sequence 1:NP_647851.3 Gene:CG11593 / 38477 FlyBaseID:FBgn0035488 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001017592.3 Gene:arhgap17a / 550254 ZFINID:ZDB-GENE-050417-56 Length:847 Species:Danio rerio


Alignment Length:377 Identity:74/377 - (19%)
Similarity:130/377 - (34%) Gaps:128/377 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LADDVLPTAPEKNILKLEQAKQDHDKEELEFKTTSALDNRILRPE---LLPMEA-------MPQR 86
            |.:.|||     ||    ||:||...|:..|.|  |||..:.|..   .||:||       ...:
Zfish   232 LLESVLP-----NI----QAQQDSWSEKPAFGT--ALDEHLKRSSREIALPIEACVMMLLETGMK 285

  Fly    87 HNIIERTLANSHPL-------------MSPTNTDSDSEPFQLKKQEKQLPR-------------- 124
            ...:.|..|.:..|             :....:|..:....||...::||.              
Zfish   286 EEGLFRIAAGASKLKKLKAALDCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMTYQLYDEWIQA 350

  Fly   125 SNFPDVVPTTETVQV------KNNLNQCR---------------NKPQDAKVSLLRANSPDILSS 168
            ||.||.....:.:.|      |||....|               ||...:.::::.  .|::|.:
Zfish   351 SNVPDPDKRLQALWVTCDQLPKNNKANFRYLVKFLAKLAQESDVNKMTPSNIAIVL--GPNLLWA 413

  Fly   169 ESDADVSQYLAAVESNFQSVSLMPNGNGKKSKRSTALPGGEDISSLDSISNHS-FDDDEDIEHNL 232
            :::..:::..||.     ||.:                    ::.:|.|..|: :...||::.|:
Zfish   414 KTEGSLAEMAAAT-----SVHV--------------------VTIIDPIIQHADWFFPEDVDFNV 453

  Fly   233 ASL----SPSSSLIDGLDGEDDDDDCEGPELLPDHDDDLELDLEFGLATTPTPNAPASATAASTL 293
            :.:    :|..:.::.|..             ||:|.........|....|..:.|...::|:.|
Zfish   454 SGMFSMPAPLPNNVNHLTP-------------PDYDSGTIERKRPGSMVGPDGDMPRRDSSANKL 505

  Fly   294 PQYTAAEERRDSRNWQKITLPDGRTREIDMRVIEPYKRVLSHGGYLKSGGQN 345
            ..:   ..||.:      |:|  |.:........|...|.:.||   :|||:
Zfish   506 MDH---NPRRGN------TVP--RKQHASPAFQPPLPPVEAAGG---AGGQS 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11593NP_647851.3 BNIP2 <293..342 CDD:463609 10/48 (21%)
CRAL_TRIO_2 345..475 CDD:463965 0/1 (0%)
arhgap17aNP_001017592.3 None

Return to query results.
Submit another query.