DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11594 and Shpk

DIOPT Version :9

Sequence 1:NP_001261391.1 Gene:CG11594 / 38473 FlyBaseID:FBgn0035484 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_083307.1 Gene:Shpk / 74637 MGIID:1921887 Length:476 Species:Mus musculus


Alignment Length:543 Identity:112/543 - (20%)
Similarity:196/543 - (36%) Gaps:133/543 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSGPFFVGVDVGTGSARAALVAC-----DGRVL----EQAVQTIQTWNPEPGYYNQSSDNIWQS 56
            |:|.|..:|:|:||.|.:|||:..     .|.|:    .:|.:. :|.:...|...:..|  ...
Mouse     1 MASRPVTLGIDLGTTSVKAALLEAAPSLPSGFVVLASCARAARA-ETESAVAGPQGREQD--VTR 62

  Fly    57 ICQVVKKVIGGVDK---SKVKGIGFDATCSLVVLGPQGSPLTVSKSG-------EAEQNIILWMD 111
            |.|.:.:.:..:.:   .:|:|||.......::....|......:.|       .|..:::.|.|
Mouse    63 IIQALNECLDALPRQQLQRVRGIGVSGQMHGILFWKAGQGCEWMEGGPAFVFEPRAVSHLVTWQD 127

  Fly   112 HRAEQETQEINAFKHSLLKYVGG-QVSLEMEVPKLLWLKRNLSQTFGNIWRVFDLPDFL-TWRAT 174
            .|..      ::|..||.|.... .|:.......:.||.:|             .|:|| ::.|.
Mouse   128 GRCN------SSFLASLPKPDSHLSVATGFGCATIFWLLKN-------------SPEFLKSYDAA 173

  Fly   175 GVDTRSLCSVVC-------------KWNY-DAANGSWNKEFLKQADLEELTQNNFEKLGSDVQPP 225
            |.....:.:::|             .|.| :..:.|||.:.|::|...       ..|..|:..|
Mouse   174 GTIQDYVVAMLCGLPRPLMSDQNAASWGYFNTQSQSWNLDTLEKAGFP-------IHLLPDIAEP 231

  Fly   226 GRTVGKGLTAKAAGELGLSAGTVVSTSLIDAHAGALGMFGCRSKESKGADDVQGKMALIAGTSTC 290
            |...|:  |:....|  :..||.|..:|.|..|   .::.|..:.:....::...:.|.|.....
Mouse   232 GSMAGR--TSHTWFE--IPKGTQVGIALGDLQA---SVYSCMGQRTDAVLNISTSVQLAASMPVG 289

  Fly   291 HMSITRKACFAQGVWGPYQDAIIPGYFLN-EGGQSIAGHLLDHVLKSHESYAELKSQLG---EDK 351
            ...:......|...:.||.|....|...: .||..:|..:  |:|      .:..:.||   |:.
Mouse   290 FQPLQTPDPAAPVAFFPYFDRTYLGVAASLNGGNVLATFV--HML------VQWMADLGLEVEES 346

  Fly   352 FIYQHLNKLLPELAAARGLSQVGCLTQDVH--VWPDLHGNR---SPIADPTLRGVITGLDMTRGT 411
            .:|..:.:     |||:        .:|.|  :.|.:.|.|   ..:|..|.   |:..|::.|.
Mouse   347 TVYSRMIQ-----AAAQ--------QKDTHLTITPTVLGERHLPDQLASVTR---ISSSDLSLGH 395

  Fly   412 ESLAIKYLAFVQALAYGTRHIIENLYQYGRAPFQTLLFCG---------GLAKNPLYVQCHADIC 467
            .:.|:            .|.|::||  :...|||.|...|         .|::|.:..|......
Mouse   396 VTRAL------------CRGIVQNL--HSMLPFQQLKEWGVARVVGSGSALSRNEVLKQEVQRAF 446

  Fly   468 NLPALIPDEQEMVLVGAAALGAA 490
            ..|.....:.:      ||.|||
Mouse   447 PFPVCFGQDVD------AAFGAA 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11594NP_001261391.1 FGGY_YpCarbK_like 5..540 CDD:212663 110/539 (20%)
5C_CHO_kinase 6..540 CDD:273552 109/538 (20%)
ShpkNP_083307.1 FGGY_SHK_like 5..466 CDD:212661 110/539 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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