DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11594 and psmc5

DIOPT Version :10

Sequence 1:NP_647848.2 Gene:CG11594 / 38473 FlyBaseID:FBgn0035484 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001003740.1 Gene:psmc5 / 445285 ZFINID:ZDB-GENE-030131-6547 Length:406 Species:Danio rerio


Alignment Length:218 Identity:45/218 - (20%)
Similarity:72/218 - (33%) Gaps:79/218 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RVLEQAVQTIQTWNPEPGYYNQSSDNIWQSICQVVKKVIGGVDKSKVKGIGFDATCSLVVLGPQG 91
            |:|.:.:|.:|    |.|.|              |.:|:..:||.||          ||.:.|:|
Zfish    57 RLLREELQLLQ----EQGSY--------------VGEVVRAMDKKKV----------LVKVHPEG 93

  Fly    92 SPLTVSKSGEAEQNIILWMDHRAEQETQEINAFKHSLLKYVGGQVSLEMEVPKLLWLKRNLSQTF 156
            ..:.     :.::||             :||....:.      :|:|..:...|..:..|.....
Zfish    94 KFVV-----DVDKNI-------------DINDVTPNC------RVALRNDSYTLHKILPNKVDPL 134

  Fly   157 GNIWRVFDLPDFLTWRATGVDTRSLCSVVCKWNYDAANGSWNKEFLKQADLEELTQNNFEKLGSD 221
            .::..|..:||.......|:|.:.                  ||..:..:|.......||.||..
Zfish   135 VSLMMVEKVPDSTYEMIGGLDKQI------------------KEIKEVIELPVKHPELFEALGIA 181

  Fly   222 -------VQPPGRTVGKGLTAKA 237
                   ..|||  .||.|.|:|
Zfish   182 QPKGVLLYGPPG--TGKTLLARA 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11594NP_647848.2 5C_CHO_kinase 6..540 CDD:273552 45/218 (21%)
psmc5NP_001003740.1 PRK03992 24..400 CDD:179699 45/218 (21%)

Return to query results.
Submit another query.