DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11594 and shpk

DIOPT Version :9

Sequence 1:NP_001261391.1 Gene:CG11594 / 38473 FlyBaseID:FBgn0035484 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_001341627.4 Gene:shpk / 100001676 ZFINID:ZDB-GENE-060526-357 Length:469 Species:Danio rerio


Alignment Length:536 Identity:108/536 - (20%)
Similarity:169/536 - (31%) Gaps:163/536 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FFVGVDVGTGSARAALVACDGRVLEQAVQTIQTWNPEPGYYNQSSDNIWQSICQVVKKVIGGVDK 70
            |.:|:|:||.|.:..|:....:.:.::.......:.....:..:.:.....|...:.:.:..:.|
Zfish    11 FVLGMDLGTTSVKVVLLEAQSKTVTESRSFTTNADISSSTHTHAKEQDPALIIAALDQCMAALPK 75

  Fly    71 SKVKGIGFDATCSLVVLGPQGSPLTVSKSGEAEQN--------------IILWMDHRAEQETQEI 121
            .|:|.:.|...|..:    .|..|..|.||...|:              :|.|.|.|.:.:....
Zfish    76 DKLKKVKFIGVCGQM----HGIVLWKSNSGCEWQSKDGITRFSPKDVSQLITWQDGRCDFDFLSA 136

  Fly   122 NAFKHSLLKYVGGQVSLEMEVPKLLWLKRNLSQTFG---NIWRVFDLPDFLT-WRATGVDTRSLC 182
            .....|.|....|                     ||   ..|.:...|:||: :...|.....:.
Zfish   137 LPKPDSHLSVATG---------------------FGCATVFWYMKHRPEFLSGFSDAGTIQDYVV 180

  Fly   183 SVVC-------------KWNY-DAANGSWNKEFLKQAD-----LEELTQNNFEKLGSDVQPPGRT 228
            |::|             .|.| :.|...||...||.|.     |..|..:            ||.
Zfish   181 SMLCSLDKCVMTGQNAASWGYFNTATNQWNTHILKDAGFPVHLLPVLVDS------------GRV 233

  Fly   229 VGKGLTAKAAGELGLSAGTVVSTSLIDAHAGALGMFGCRSKESKGADDVQGKMALIAGTSTCHMS 293
            .|.    .:....|:.|.|.|        ..|||.|.| |..|...|         .|.:..:||
Zfish   234 AGH----TSCEWYGIPAHTAV--------GAALGDFQC-SVYSCITD---------RGHAVLNMS 276

  Fly   294 ITRKACF---AQGVWGPYQDAIIP-GYF-------------LNEGGQSIAG--HLLDHVLKSHES 339
            .:.:..|   |:.......|.:.| .||             || ||..:|.  .:||..:|    
Zfish   277 TSAQLTFRMPAEFTPTSSPDPLSPIAYFPYFEGSYLAVAASLN-GGNVMATFVRMLDSWMK---- 336

  Fly   340 YAELKSQLGEDKFIYQHLNKLLPELAAARGLSQVGCLTQDVHVWPDLHGNRSPIADPTLRGVITG 404
              |...::.|.....|.::..|.:            ...|:.|...|.|.|...:.......|:.
Zfish   337 --EFGLEVSESSIYSQLIHSALAQ------------PNTDLTVTSTLLGERHAPSSSASVSHISS 387

  Fly   405 LDMTRGTESLAIKYLAFVQALAYGTRHIIENLYQYGRAPFQTLLFCGGLAKNPLYVQC-----HA 464
            .:::.|..:.|:            .|.|||||..  ..|.|:|...|        |:|     .|
Zfish   388 SNLSLGHVTRAV------------CRGIIENLAT--MMPPQSLRAAG--------VRCIIGSGSA 430

  Fly   465 DICNLPALIPDEQEMV 480
            ..||  |::..|.|.|
Zfish   431 LSCN--AVLQQEVERV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11594NP_001261391.1 FGGY_YpCarbK_like 5..540 CDD:212663 108/536 (20%)
5C_CHO_kinase 6..540 CDD:273552 108/536 (20%)
shpkXP_001341627.4 FGGY_SHK_like 11..464 CDD:212661 108/536 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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