DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mul1 and lrsam1

DIOPT Version :10

Sequence 1:NP_647847.1 Gene:Mul1 / 38472 FlyBaseID:FBgn0035483 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001093474.1 Gene:lrsam1 / 562066 ZFINID:ZDB-GENE-060526-97 Length:721 Species:Danio rerio


Alignment Length:59 Identity:24/59 - (40%)
Similarity:35/59 - (59%) Gaps:4/59 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 PHTLSQDQL---CVVCSTNPKEIILLPCGHVCLCEDCAQKISVTCPVCRGSIVSKAAAF 336
            |.|.:.|:.   ||||.....::|.|||||||.|:.|:..:. :||:|||||..:...:
Zfish   662 PTTPNPDRFNSECVVCMELESQVIFLPCGHVCCCQTCSDALQ-SCPLCRGSISQRVRIY 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mul1NP_647847.1 GIDE 89..243 CDD:403620
mRING-HC-C3HC5_CGRF1-like 288..326 CDD:438311 16/40 (40%)
lrsam1NP_001093474.1 leucine-rich repeat 32..53 CDD:275380
leucine-rich repeat 54..81 CDD:275380
LRR <57..>180 CDD:443914
leucine-rich repeat 82..104 CDD:275380
leucine-rich repeat 105..127 CDD:275380
leucine-rich repeat 128..150 CDD:275380
leucine-rich repeat 151..173 CDD:275380
Smc <249..>533 CDD:440809
SAM_TAL 559..623 CDD:188922
RING-HC_LRSAM1 671..718 CDD:438178 21/47 (45%)
Blue background indicates that the domain is not in the aligned region.

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