DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and foxc1b

DIOPT Version :9

Sequence 1:NP_001246609.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_571804.1 Gene:foxc1b / 79375 ZFINID:ZDB-GENE-010302-2 Length:433 Species:Danio rerio


Alignment Length:434 Identity:120/434 - (27%)
Similarity:180/434 - (41%) Gaps:155/434 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SPNPLAPSAVGGAGMEGLMCGSFSPAFY-------YQGIDSFLALHNNIWGLPISFLHNSH---- 87
            ||..:.|...|..|            ||       |.|:.:.:::::          |.:|    
Zfish    11 SPLGVVPYIPGDQG------------FYRTATGGGYTGMPAPMSMYS----------HATHEQYP 53

  Fly    88 --------------RPE---KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGW 135
                          :|:   |||:||||||.|||.::.::::||:|||:|||::||:||:|||||
Zfish    54 GGMARAYGPYAPAQQPKDMVKPPYSYIALITMAIQNSSDKKITLNGIYQFIMERFPFYRDNKQGW 118

  Fly   136 QNSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGHP 200
            |||||||||||:||||:||      |:...||||||.||..:.:|||.|::.|||.|.::.....
Zfish   119 QNSIRHNLSLNECFVKVPR------DDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVLR 177

  Fly   201 NRYERE-SGKDSNDGNSSAAEIRSP-------------------SEPLSDFDIFCNERPNYSD-- 243
            .:.:|: .||| |.|.:...:.:.|                   :.|||  .:...|.|:.|.  
Zfish   178 EKEDRDRQGKD-NPGQACEQDAQQPVKLRDIKTENGACTPPHDSTPPLS--TVPKTESPDRSGGS 239

  Fly   244 ------------------------RITDLHRQYL---------SVSLGFN--------------- 260
                                    |.:..|...|         ||||.::               
Zfish   240 ACSGSPQSQTPQQAFSMDTIMTGLRGSPQHAAELPASRAALPGSVSLTYSPTPQPAHYSPPCGQP 304

  Fly   261 ----------SLFNNE-ARGLRPLPEIRECPDDVDASSSSSKAMQSSMELHEELHSPSAFTPPLN 314
                      ||:..: ..|...|||.....:    :||.|...|||.:  |..|.......|..
Zfish   305 ATYHCNMQATSLYTGDRGHGDDTLPEYTNTTN----ASSISHPHQSSSQ--ESQHLQQNRLAPWY 363

  Fly   315 RRETS-----SSGAPVLAEAFNGIKDVVD----APGSSPVASSN 349
            ..::.     |:..|...:.|:.::::.:    |..||||..||
Zfish   364 LNQSGELGHLSASYPGQQQNFHAVREMFETQRIALNSSPVTGSN 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_001246609.1 FH 91..185 CDD:214627 58/93 (62%)
foxc1bNP_571804.1 Forkhead 74..160 CDD:278670 57/91 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..250 13/78 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..355 12/42 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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