DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxL1 and Foxm1

DIOPT Version :9

Sequence 1:NP_001246609.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_113821.2 Gene:Foxm1 / 58921 RGDID:61807 Length:771 Species:Rattus norvegicus


Alignment Length:309 Identity:82/309 - (26%)
Similarity:123/309 - (39%) Gaps:66/309 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EKPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRE-NKQGW------------QNSIRH 141
            |:||:||:|:|..||:|...:|:||..||.:|.|.|||::. .|.||            ||||||
  Rat   234 ERPPYSYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAKPGWKCWHQAYHKLGPQNSIRH 298

  Fly   142 NLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSAS------DMF---EQGNYR---RRRTRRQ 194
            ||||:|.||:         :..:.||.|:|.:..||:      .:|   |.|:.:   ...::::
  Rat   299 NLSLHDMFVR---------ETSANGKVSFWTIHPSANRYLTLDQVFKPLEPGSPQSPEHLESQQK 354

  Fly   195 RHCGHPNRYERESGKDSNDGNSSAAEIRSPSEP-----LSDFDIFCNE----RPNY--------S 242
            |    ||...|.:.....:....|.....|..|     |.......|:    :|:.        |
  Rat   355 R----PNPELRRNVTIKTELPLGARRKMKPLLPRVSSYLVPIQFPVNQSLVLQPSVKVPLPLAAS 415

  Fly   243 DRITDLHRQYLSVSLGFNSLFNNEARGLRPLPEIRECPDDVDASSSSSKAMQSSMELHEELHSPS 307
            ...::|.|....|.:....|.:||  |:.|||......::..........:.....:.||:..|.
  Rat   416 LMSSELARHSKRVRIAPKVLLSNE--GIAPLPATEPMKEEKPLLGEGLLPLLPIQSIKEEVIQPG 478

  Fly   308 AFTPPLNR---------RETSSSGAPVLAEAFNGIKDVVDAPGSSPVAS 347
            ...|.|.|         .|..|..|.|..|..|..:|...:|...|..|
  Rat   479 EDIPHLERPIKVESPPLEEWPSPCASVKEELSNSWEDSSCSPTPKPKKS 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_001246609.1 FH 91..185 CDD:214627 43/115 (37%)
Foxm1NP_113821.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..165
FH 235..322 CDD:238016 39/95 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..361 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..568
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..655
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..718
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.