DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and foxn2

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001017017.1 Gene:foxn2 / 549771 XenbaseID:XB-GENE-952918 Length:334 Species:Xenopus tropicalis


Alignment Length:287 Identity:80/287 - (27%)
Similarity:114/287 - (39%) Gaps:72/287 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GMEGLMCGSFSPAFYYQGIDSFLALHNNIWGLPISFLHNSHRPE------KPPFSYIALIAMAIS 105
            |.||:..|  ||.:..:|..|           |    .....||      |||:|:..||.|||.
 Frog    75 GSEGVPTG--SPLYDIEGDLS-----------P----SGCQTPEKLSASSKPPYSFSLLIYMAIE 122

  Fly   106 SAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSY 170
            .:||:.|.:..||.:|:|:|||:.....||:||:|||||||..|.|:.|....:.     ||||.
 Frog   123 HSPNKCLPVKDIYSWILDRFPYFATAPTGWKNSVRHNLSLNKYFQKVERSHGKVN-----GKGSL 182

  Fly   171 WMLDSSASDMFEQGNYRRRRTRRQRHCGHPNRYERESGKDSNDGNSSAAEIRSPSEPLSDFDIFC 235
            |.:|........|.      .::|........|...:...|....||.:.:.|..| :.:| |..
 Frog   183 WCVDPEYKPSLIQA------LKKQPFSSALALYTPPTSPTSVSSRSSVSSLSSVEE-VYEF-IPK 239

  Fly   236 NERPN-------YSDRITDLHRQ--------YLS---VSLGFNSLFNNEAR-------------- 268
            |.|..       :|:..||:..:        |:|   ::...|.|..|:.|              
 Frog   240 NSRAGSDGSEGFHSEDDTDIDYEEDMLGDSGYVSQPCINPSSNDLHGNKLRKEACQDIDDELKEA 304

  Fly   269 --GLRPLPEIRECPDDV--DASSSSSK 291
              .|..|..||.|.|.:  .|.:.|.|
 Frog   305 AGSLLHLAGIRTCLDSLLKTAKAQSQK 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 42/102 (41%)
foxn2NP_001017017.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..108 7/39 (18%)
FH_FOXN2 107..188 CDD:410832 39/85 (46%)
Blue background indicates that the domain is not in the aligned region.

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