DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and foxn3

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001016300.2 Gene:foxn3 / 549054 XenbaseID:XB-GENE-483117 Length:486 Species:Xenopus tropicalis


Alignment Length:261 Identity:77/261 - (29%)
Similarity:108/261 - (41%) Gaps:73/261 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRD 155
            |||:|:..||.|||..:|.:||.:..||.:|::.|||:.....||:||:|||||||.||.|:.:|
 Frog   113 KPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKD 177

  Fly   156 KNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGHPNRYERESGKDSNDGNSSAAE 220
            :     :.|.||||.|.:|.         .||:                          |...|.
 Frog   178 R-----SQSIGKGSLWCIDP---------EYRQ--------------------------NLIQAL 202

  Fly   221 IRSPSEPLSDFDIFCNERPNYSDRITDLHRQYLSVS---LGFNSLFNNEARGLRPLPEIRECPDD 282
            .::|..|.|  .:| |..|...       :.|.|.|   |...|.|..:...|...|       |
 Frog   203 KKTPYHPYS--HVF-NTPPTSP-------QAYQSTSVPPLWPGSTFFKKNGALLQDP-------D 250

  Fly   283 VDASSSSSKAMQSSMELHEELHSPSAFTPPLNRRETSSSGAPVLAEA-FNGIKDVVDAPGSSPVA 346
            :||:        |:|.|....|...|..||    ....:||.||... |:|::.:...|..:..|
 Frog   251 IDAA--------SAMMLLNSAHELQAGLPP----GVIQNGARVLNRGIFSGVRPLPINPIGAMAA 303

  Fly   347 S 347
            |
 Frog   304 S 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 40/94 (43%)
foxn3NP_001016300.2 FH_FOXN3 113..202 CDD:410833 43/128 (34%)

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