DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and foxa4

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_988938.1 Gene:foxa4 / 394535 XenbaseID:XB-GENE-486455 Length:399 Species:Xenopus tropicalis


Alignment Length:247 Identity:93/247 - (37%)
Similarity:125/247 - (50%) Gaps:50/247 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VNSMLANPDYLRTQVSPNPLA------------PSAVGGAGMEGL----MCGSF-----SPAF-- 60
            :|:.|.:..:|.|.||..|.:            .|..|..|..|.    |.||.     :||:  
 Frog    31 MNNGLPSNSFLPTDVSTVPTSMPYMSNGLSGPVTSIQGNLGSLGSMTQGMVGSLAPPASTPAYPM 95

  Fly    61 -YYQGIDSFLALHNNIWGLPISFLHN-SHRPEKPPFSYIALIAMAISSAPNQRLTLSGIYKFIMD 123
             |.||...|..       .|.::..| ||  .|||:|||:||.|||..|||:.:||:.||::|:|
 Frog    96 GYCQGESEFQR-------DPRTYRRNYSH--AKPPYSYISLITMAIQQAPNKMMTLNEIYQWIID 151

  Fly   124 KFPYYRENKQGWQNSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRR 188
            .|||||:|:|.|||||||:||.||||||:||..      :..||||||.|...:.:|||.|.|.|
 Frog   152 LFPYYRQNQQRWQNSIRHSLSFNDCFVKVPRSP------EKPGKGSYWTLHPESGNMFENGCYLR 210

  Fly   189 RRTR----------RQRHCGHPNRYERESGKDSNDGNSSAAEIRSPSEPLSD 230
            |:.|          |::....|......|.|::..|....:..|||..|::|
 Frog   211 RQKRFKCERSKSGEREKKVNKPGDENGGSLKETPVGYDDCSSSRSPQAPVND 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 55/96 (57%)
foxa4NP_988938.1 Forkhead_N <25..118 CDD:369872 24/95 (25%)
FH_FOX 107..217 CDD:469596 63/117 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..290 10/44 (23%)
HNF_C 326..387 CDD:430552
Blue background indicates that the domain is not in the aligned region.

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