DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxL1 and bin

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster


Alignment Length:375 Identity:105/375 - (28%)
Similarity:153/375 - (40%) Gaps:81/375 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RTQVSPNPLAPSAVGGAGMEGLMCGSFSPAFYYQGIDSFLA----LHNNIWGLPI---------- 80
            |...||:.:..:| .|..:......|.|||....|.:|...    |.|.:.|..:          
  Fly   230 RISTSPSQVISNA-HGMPVLNYSSSSSSPAKSLNGSESSPPSQNHLENKVSGSAVVGTGGSSQQD 293

  Fly    81 -------SFLHNSHRPEKPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNS 138
                   :....:.|||||..|||.:|..||..:|..:||||.||.::...:.::|....||:||
  Fly   294 APSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNS 358

  Fly   139 IRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQR-------H 196
            :|||||||:||.|:|:....    ...|||:||.:|.:::.:||.....|||.|..|       :
  Fly   359 VRHNLSLNECFKKLPKGMGV----GKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSKIKVKPY 419

  Fly   197 CGHPNRYERESGKDS--NDGNSSAAEIRSPSEPLSDFDI--FCNERPNYSDRITD------LHRQ 251
            .||.|.|......|:  ::||..|    ||:....|:..  .....|.......|      .|..
  Fly   420 AGHANGYYASGYGDAGMDNGNYYA----SPAFASYDYSAAGATGVSPAGGQGFADPWNAHAAHSG 480

  Fly   252 YLSVSLGFNSLFNNEARGLRPLPEIRECPDDVDASSSSSKAMQSSMELHEELHSPSAFTPPLNRR 316
            ..||.:|.         |:.|||:.         ::.|..|...::       :.||.||||...
  Fly   481 SSSVGVGM---------GVGPLPQY---------TNISCLAAGGNV-------NGSATTPPLAHS 520

  Fly   317 ------ETSSSGAPVLAEAFNGIKDVVDAPGSSPVASSNRSKTTLFTIDN 360
                  ..|||.:| |..|.....|.  ||.:|.||:.....|:..::||
  Fly   521 ALGMAPSASSSSSP-LGAAATLQSDY--APTASLVAAGYSYATSAGSLDN 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 41/96 (43%)
binNP_523950.2 FH_FOX 312..391 CDD:469596 35/82 (43%)

Return to query results.
Submit another query.