DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and Foxn3

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_006240491.1 Gene:Foxn3 / 314374 RGDID:1305711 Length:479 Species:Rattus norvegicus


Alignment Length:346 Identity:84/346 - (24%)
Similarity:127/346 - (36%) Gaps:127/346 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRD 155
            |||:|:..||.|||..:|.:||.:..||.:|::.|||:.....||:||:|||||||.||.|:.::
  Rat   114 KPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKE 178

  Fly   156 KNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGH-----PNRYERESGKDSNDGN 215
            :     :.|.||||.|.:|.         .||:...:..:...:     |..|:..||.....|:
  Rat   179 R-----SQSIGKGSLWCIDP---------EYRQNLIQALKKTPYHPPPTPQAYQSTSGPPIWPGS 229

  Fly   216 S----SAAEIRSPSEPLSDFDIFCNERPNYSDRITDLHRQYLSVSLGFN-SLFNNEAR------- 268
            :    :.|.::.|....:...:..|..|              .:..||: .:..|.||       
  Rat   230 TFFKRNGALLQDPDIDAASAMMLLNSPP--------------EIQAGFSPGVIQNGARVLSRGLF 280

  Fly   269 -GLRPLP------------EIREC---------------------------------------PD 281
             |.||||            .|..|                                       .|
  Rat   281 PGARPLPITPIGMTAAIRNSITSCRVRTESEPPCGSPVVSGDPKEDHNYSSAKSSNARSTSPTSD 345

  Fly   282 DVDASSSSS------------KAMQSSMELHEELHSPSAFTPPLNRRETSSSGAPVLAEAFNGIK 334
            .:.:||||:            :..:.|.:.||. ||    .|..:.|:.|.             |
  Rat   346 SISSSSSSADDHYEFATKGSQEGSEGSFQSHES-HS----EPEEDDRKPSQ-------------K 392

  Fly   335 DVVDAPGSSPVASSNRSKTTL 355
            :..||.|.|..||.:|.:..|
  Rat   393 EGKDALGDSGYASQHRKRQHL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 39/94 (41%)
Foxn3XP_006240491.1 FH_FOXN3 114..203 CDD:410833 41/102 (40%)

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