DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxL1 and foxd2

DIOPT Version :9

Sequence 1:NP_001246609.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_571346.2 Gene:foxd2 / 30525 ZFINID:ZDB-GENE-980605-6 Length:369 Species:Danio rerio


Alignment Length:287 Identity:104/287 - (36%)
Similarity:136/287 - (47%) Gaps:44/287 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRD 155
            |||:||||||.|||..:|.:|||||.|.:||.::||||||....||||||||||||||||||||:
Zfish    95 KPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPRE 159

  Fly   156 KNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGHPNRYERESG----------KD 210
            ..      :.|||:||.||..::|||:.|::.|||.|.:||  ..|...||:|          ..
Zfish   160 PG------NPGKGNYWTLDPESADMFDNGSFLRRRKRFKRH--QTNEILREAGGFLPGFGYGPYG 216

  Fly   211 SNDG----NSSAAEIRSPSEPLSDFDIFCNER---PNYSDRITDLHRQYLSVSLGFNSLFNNEAR 268
            .|.|    |..|.....|..|.|.|. |.|..   |..|...:..|        ...|....|.|
Zfish   217 YNYGLQLQNFHAHHPYHPHHPGSAFP-FQNTHCALPTPSSIFSTPH--------SLPSFLGTELR 272

  Fly   269 -----GLRP-LPEIRECPDDVDASSSSSKAMQSSMELHEELHSPSAFTPPLNRRETSSSGAPVLA 327
                 .|.| ||.:.....|.:..|..|.::.:.:.......||.. |.|..:.:..:...|.||
Zfish   273 KPFYPQLSPTLPGLAPLKTDTNGPSRPSFSIDNIIGAASSPASPYT-TQPAGQAQILAMLTPTLA 336

  Fly   328 EAFNGI---KDVVDAPGSSPVASSNRS 351
            .|.|.:   ::.:..||:...:|...|
Zfish   337 SATNHLSITQETMLQPGTQTFSSKTSS 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_001246609.1 FH 91..185 CDD:214627 57/93 (61%)
foxd2NP_571346.2 Forkhead 95..181 CDD:278670 57/91 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2114
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.