DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxL1 and Foxn2

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_237502.5 Gene:Foxn2 / 301676 RGDID:1562291 Length:428 Species:Rattus norvegicus


Alignment Length:404 Identity:108/404 - (26%)
Similarity:158/404 - (39%) Gaps:108/404 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LPSCYANGSMLPDNEE-------LVNS-----MLANPDYLRTQVSPNPLAPSAVGGAGMEGLMCG 54
            |...|..|| ||:..|       ||.|     .|.|.::|..  |.:.|....:||.|:.     
  Rat    24 LSQIYKMGS-LPEAGEASRPKATLVGSDSTDDELTNLNWLHE--SSDLLTNLRLGGEGLP----- 80

  Fly    55 SFSPAFYYQGID--SF--LALHNNIWGLPISFLHNSHRPE------KPPFSYIALIAMAISSAPN 109
            ..||.:..:|.|  ||  |...|               ||      |||:|:..||.|||..:||
  Rat    81 MVSPLYDIEGDDMPSFGPLCCQN---------------PEKKSATSKPPYSFSLLIYMAIEHSPN 130

  Fly   110 QRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLD 174
            :.|.:..||.:|:|:|||:.....||:||:|||||||.||.|:.|....:.     ||||.|.:|
  Rat   131 KCLPVKEIYSWILDRFPYFATAPTGWKNSVRHNLSLNKCFQKVERSHGKVN-----GKGSLWCVD 190

  Fly   175 SSASDMFEQGNYRRRRTRRQRHCGHPNRYERESGKDSNDGNSSAAEIRSPSEPLSDFD-----IF 234
            ........|...::..:..|.....|: |.....|.|        ::::..|  ||.|     |.
  Rat   191 PEYKPNLVQALKKQPFSSPQSASLSPH-YLSSVLKQS--------QVQTLKE--SDIDAATAMIL 244

  Fly   235 CNERPNYSDRITDLHRQY--------LSVSL----GFNSLF-----------NNEARGLRPLPEI 276
            .|         |.:.::.        |..||    .:.|.|           ::.|..:.|..:.
  Rat   245 LN---------TSIEQEMLECEKPLPLKTSLQKKRSYGSAFSAPSAVQLQESHSPASSIDPKADH 300

  Fly   277 RECPDDVDASSSSSKAMQSSMELHEELHSPSAFTPPLNRRETSSSGAPVLAEAFNGIKDVVDAPG 341
            ......|.|...:|:|..||:...:|::.   |.|      .||.|....:|.|:..:: .||..
  Rat   301 NYSASGVAAQRCASRASMSSLSSVDEVYE---FIP------KSSHGGSDGSEGFHSDEE-TDAED 355

  Fly   342 SSPVASSNRSKTTL 355
            ..|:|.|..:...|
  Rat   356 EDPLADSGYAPQAL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 43/102 (42%)
Foxn2XP_237502.5 FH_FOXN2 111..192 CDD:410832 40/85 (47%)

Return to query results.
Submit another query.