DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and foxa2

DIOPT Version :9

Sequence 1:NP_001246609.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_571024.1 Gene:foxa2 / 30126 ZFINID:ZDB-GENE-980526-404 Length:409 Species:Danio rerio


Alignment Length:434 Identity:121/434 - (27%)
Similarity:181/434 - (41%) Gaps:134/434 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PSCYA--------------------NGSMLPDNEELVNSMLANPDYLRTQVSP-----NPLAPSA 42
            |.||.                    :|.....|....|:|  |..|:.|.:||     :|...:.
Zfish    23 PECYTSVSNMNTGLGMNSMNTYMTMSGMSSTANMTAANTM--NMSYVNTGMSPSMTGMSPGTGAM 85

  Fly    43 VG-GAGMEGLMCGSFSPAF--------------YYQGIDSFLALHNNIWGLPISFLHNSHRPE-- 90
            .| ||||.| |..:.||..              .|..:::...::..      |.::.|..|:  
Zfish    86 AGMGAGMTG-MSAALSPTMSPMAAQAPSMNALTSYSNMNAMSPMYGQ------SNINRSRDPKTY 143

  Fly    91 -------KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDC 148
                   |||:|||:||.|||..:|::.||||.||::|||.||:||:|:|.|||||||:||.|||
Zfish   144 RRSYTHAKPPYSYISLITMAIQQSPSKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDC 208

  Fly   149 FVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGHPNRYERESGKDSND 213
            |:|:||..      |..||||:|.|...:.:|||.|.|.||:.|.:  |  ..:..::..:.:::
Zfish   209 FLKVPRSP------DKPGKGSFWTLHPDSGNMFENGCYLRRQKRFK--C--DKKLSKDPSRKTSE 263

  Fly   214 GNSSAAEIRSPSEPLSDFDIFCNERPNYSDRITDLHRQYLSVSLGFNSLFNNEARGLRPLPEIRE 278
            |.|:     |.||..:.     ||.|:.:....:|.|....:..|         :||.|      
Zfish   264 GGSN-----SSSESCNG-----NESPHSNSSSNELKRSLSDMKSG---------QGLSP------ 303

  Fly   279 CPDDVDASSSSSK----AMQSSMELHEELHSPS---AFTPPLNRRETSSS--------------- 321
               |..||.:|..    |...|:..||....|.   :|..|.:.....||               
Zfish   304 ---DHAASPTSQAQHLLAQHHSVLAHEGHLKPEHHYSFNHPFSINNLMSSEQQHHKMDLKTYEQV 365

  Fly   322 -----GAPV---LAEAFNGIKDVVDAPGSS--------PVASSN 349
                 |:|:   |:......|..:|:|.:|        |:.:|:
Zfish   366 MHYGYGSPMAGTLSMGSMASKAGLDSPDTSYYQGVYSRPILNSS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_001246609.1 FH 91..185 CDD:214627 53/93 (57%)
foxa2NP_571024.1 Forkhead_N 18..150 CDD:254796 26/135 (19%)
FH 151..239 CDD:214627 53/93 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..315 18/92 (20%)
HNF_C 340..398 CDD:286443 10/57 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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