DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and Foxn1

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001094118.2 Gene:Foxn1 / 287469 RGDID:3970 Length:648 Species:Rattus norvegicus


Alignment Length:212 Identity:63/212 - (29%)
Similarity:91/212 - (42%) Gaps:55/212 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LPS----CYANGSMLPDNEELVNSMLANPDYLRTQVSPNPLAPSAVGGAGM-------EGLMCGS 55
            |||    .:.||...|..|.  |.:|...:   .:|.|..|.    .|.||       :.:.|.|
  Rat   172 LPSFPAEAWCNGLPYPSQEH--NQVLQGSE---VKVKPQALD----NGPGMYCYQPPLQHVYCSS 227

  Fly    56 FSPAF--YYQGIDSFLALHNNIWGLPISFLHNSHRP-----------------EKPPFSYIALIA 101
             .|.|  |..|..|:          |:.:|.::|.|                 .||.:||..||.
  Rat   228 -QPTFHQYSPGGGSY----------PVPYLGSTHYPYQRIAPQANADGHQPLFPKPIYSYSILIF 281

  Fly   102 MAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRDKNTIEDNDSAG 166
            ||:.::....|.:|.||.|:.:.|||::....||:||:|||||||.||.|:..     :...|:.
  Rat   282 MALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVEN-----KSGSSSR 341

  Fly   167 KGSYWMLDSSASDMFEQ 183
            ||..|.|:.|..|..::
  Rat   342 KGCLWALNPSKIDKMQE 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 38/112 (34%)
Foxn1NP_001094118.2 FH_FOXN1 270..366 CDD:410830 37/94 (39%)

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