DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxL1 and fkh-10

DIOPT Version :9

Sequence 1:NP_001246609.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_492676.2 Gene:fkh-10 / 182874 WormBaseID:WBGene00001442 Length:194 Species:Caenorhabditis elegans


Alignment Length:168 Identity:67/168 - (39%)
Similarity:98/168 - (58%) Gaps:19/168 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LPISFLHNSHRP-----EKPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQN 137
            :|:||..:...|     .||..|||.||||||.|:|.:::.|:.:|::||:::||:|....||:|
 Worm    24 IPLSFDTSIMSPTECQQPKPQHSYIGLIAMAILSSPQKKMVLAEVYEWIMNEYPYFRSRGAGWRN 88

  Fly   138 SIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRR--QRHCGHP 200
            ||||||||||||||..|..|        |||.||.:..:....||:|::||||.:|  :||.|  
 Worm    89 SIRHNLSLNDCFVKAGRAAN--------GKGHYWAVHPACVKDFERGDFRRRRAQRKVRRHMG-- 143

  Fly   201 NRYERESGKDSNDGNSSAAEIRSPSEPLSDFDIFCNER 238
              .:.|.|..|::..|..::...|..|.:.::..|..|
 Worm   144 --LQVEDGDSSDEEGSPGSDPSPPIFPTALWNFNCAPR 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_001246609.1 FH 91..185 CDD:214627 46/93 (49%)
fkh-10NP_492676.2 Forkhead 41..125 CDD:365978 44/91 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2114
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.