DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and fkh-6

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_494775.1 Gene:fkh-6 / 181907 WormBaseID:WBGene00001438 Length:323 Species:Caenorhabditis elegans


Alignment Length:301 Identity:103/301 - (34%)
Similarity:145/301 - (48%) Gaps:61/301 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LPISFLHNSHRPEKPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRE----NKQGWQNS 138
            ||...:...:..:|||:||:|||||||.::|::|:||:.|||||..||||||:    .|||||||
 Worm     8 LPFHIVQEGNSIDKPPYSYVALIAMAIDASPDKRMTLNQIYKFIEAKFPYYRDADAKRKQGWQNS 72

  Fly   139 IRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQ--RHCGHPN 201
            |||||||||||||..||..:.. ||.  ||:||.:.:..:..|:.||::|||.:|.  ...|:.|
 Worm    73 IRHNLSLNDCFVKKARDGQSCA-NDR--KGNYWQMVADNAPQFDNGNFKRRRVKRLGIGKMGYAN 134

  Fly   202 RYE-RESGKDSNDGNSSAAEIRSPS--EPLSDFDIFCNERPNYSDRITDLHRQYLSVSLGFNSLF 263
            ..| .|:|............::.|.  :.:..|..|..:.||   .|||...         .|..
 Worm   135 TTETTETGTILQQQLPFFNGLKWPQNIQTMDPFQFFKFQYPN---SITDSAN---------TSQI 187

  Fly   264 NNEARGLRPLPEIRECPDDVDASSSSSKAMQSSMELHEELHSPSAFTPPLNRRETS----SSGAP 324
            ||                    |||||.:..:|:       ..|||..|.:..:|:    |...|
 Worm   188 NN--------------------SSSSSSSFDTSI-------YTSAFPIPTSHFDTNLVAPSQPPP 225

  Fly   325 VLAEA----FNGIKD--VVDAPGSSPVASSNRSKTTLFTID 359
            |:::.    .:.:|:  :||.....|..||....|:|...|
 Worm   226 VVSDVEVVPSDTVKEEVLVDMKPLIPGISSTTFLTSLQMTD 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 57/100 (57%)
fkh-6NP_494775.1 FH_FOXL2 21..116 CDD:410802 56/97 (58%)

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