DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxL1 and Foxd1

DIOPT Version :9

Sequence 1:NP_001246609.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_599164.2 Gene:Foxd1 / 171299 RGDID:621712 Length:455 Species:Rattus norvegicus


Alignment Length:396 Identity:123/396 - (31%)
Similarity:169/396 - (42%) Gaps:104/396 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GSMLPDNEELVNSMLANPDYL----------------RTQVSPNPLAPSAVGGAGMEGLMC-GSF 56
            ||.||.:.:......|..|.|                |...||.|..|:...|||..|  | |:.
  Rat    41 GSQLPSSAQRRRRSYAGEDELEDLEEEDDDEDLLLASRPAASPAPPGPAPAPGAGSGG--CSGAG 103

  Fly    57 SPAFYYQGIDSFLALHNNIWGLPISFLHNSHRP-EKPPFSYIALIAMAISSAPNQRLTLSGIYKF 120
            :......|:.:         |.......:|..| .|||:||||||.|||..:|.:|||||.|.:|
  Rat   104 AGGGAGGGVGA---------GAGTGGGGSSKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEF 159

  Fly   121 IMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGN 185
            |..:||||||....||||||||||||||||||||:..      :.|||:||.||..::|||:.|:
  Rat   160 ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPG------NPGKGNYWTLDPESADMFDNGS 218

  Fly   186 YRRRRTRRQR------HCGHPNRYERESGKDSNDGNSSAAEIRSPSEPLSDFDIFCNERPNYSDR 244
            :.|||.|.:|      |........|.:|..::.|:..||....|..|                 
  Rat   219 FLRRRKRFKRQPLLAPHAAAEALLLRGAGPAASAGDPGAALFPPPPPP----------------- 266

  Fly   245 ITDLHRQYLSVSLGFNSLFNNEARGLRPLPEIREC--PDDVDASSSSSKAMQSSMELHEELHSPS 307
                      .:.|:.:.  ..|.||:..|    |  |..:.|:::::.|    ...|.  |||.
  Rat   267 ----------PACGYGAY--GCAYGLQLPP----CAPPSALFAAAAAAAA----AAFHP--HSPP 309

  Fly   308 AFTPP-------LNRRETSSSGAP-VLAEAFNG------IKDVVDAPGSSPVASSNRSKTTLFTI 358
            ...||       .....|:....| .||.|..|      :|  ...||::.:|.|.      |:|
  Rat   310 PPPPPPPPPGAAAELARTAFGYRPHALAAALPGPLQAAAVK--AGGPGTAALARSP------FSI 366

  Fly   359 DNIIGK 364
            :::||:
  Rat   367 ESLIGR 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_001246609.1 FH 91..185 CDD:214627 57/93 (61%)
Foxd1NP_599164.2 FH_FOXD1_D2-like 130..228 CDD:410820 62/103 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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