DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and Foxa3

DIOPT Version :9

Sequence 1:NP_001246609.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_032286.1 Gene:Foxa3 / 15377 MGIID:1347477 Length:353 Species:Mus musculus


Alignment Length:381 Identity:121/381 - (31%)
Similarity:154/381 - (40%) Gaps:124/381 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SMLPDNEELVNSMLANPDYL--RTQVSP---NPLAPSA-----------VGGAGMEGLMCGSFSP 58
            :|.|.|..:..:.|::| |.  ..|.||   .||||.|           :|..|..|   ||.| 
Mouse    33 TMAPLNSYMTLNPLSSP-YPPGGLQASPLPTGPLAPPAPTAPLGPTFPSLGTGGSTG---GSAS- 92

  Fly    59 AFYYQGIDSFLA-----LHNNIWGLPISFLHNSHRP---EKPPFSYIALIAMAISSAPNQRLTLS 115
                    .::|     :|..      .......||   .|||:|||:||.|||..||.:.||||
Mouse    93 --------GYVAPGPGLVHGK------EMAKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLS 143

  Fly   116 GIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDM 180
            .||::|||.|||||||:|.|||||||:||.||||||:.|..      |..||||||.|..|:.:|
Mouse   144 EIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSP------DKPGKGSYWALHPSSGNM 202

  Fly   181 FEQGNYRRRRTRRQRHCGHPNRYERESGKDSNDGNS----------------SAAEIRSPSEPLS 229
            ||.|.|.||:.|.:.         .|..|..|...|                :|..:.||::|  
Mouse   203 FENGCYLRRQKRFKL---------EEKAKKGNSATSASRNGTAGSATSATTTAATAVTSPAQP-- 256

  Fly   230 DFDIFCNERPNYSDRITDLHRQYLSVSLGFNSLFNNEARGLRPLPEIRECPDDVD----ASSSSS 290
                    :|..|:                              || .:..|||.    ||..||
Mouse   257 --------QPTPSE------------------------------PE-AQSGDDVGGLDCASPPSS 282

  Fly   291 KAMQSSMELHEE--LHSPSAFTPP--LNRRETSSSGAP-VLAEAFNGIKDVVDAPG 341
            ....|.:||..|  |.:|..|..|  :|...:..:..| .|...|.|.......||
Mouse   283 TPYFSGLELPGELKLDAPYNFNHPFSINNLMSEQTSTPSKLDVGFGGYGAESGEPG 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_001246609.1 FH 91..185 CDD:214627 58/93 (62%)
Foxa3NP_032286.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..83 8/30 (27%)
FH 119..207 CDD:214627 58/93 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..287 19/108 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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