DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and Foxa1

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_032285.2 Gene:Foxa1 / 15375 MGIID:1347472 Length:468 Species:Mus musculus


Alignment Length:415 Identity:122/415 - (29%)
Similarity:168/415 - (40%) Gaps:128/415 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NGSMLPDNEELVNSMLANPDYLRTQVSPNPLAPSAVGGAGMEGLMCGSFS--------------- 57
            :|:|.|.:        .|..|..|.:... |:|.||  |||.|...|:.:               
Mouse    56 SGNMTPAS--------FNMSYANTGLGAG-LSPGAV--AGMPGASAGAMNSMTAAGVTAMGTALS 109

  Fly    58 ----------PAFYYQGIDSFLALHNNIWGLPISF------------------LHNSHRPEKPPF 94
                      ||....|:..:.|..|.... |:::                  ...|:...|||:
Mouse   110 PGGMGSMGAQPATSMNGLGPYAAAMNPCMS-PMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPY 173

  Fly    95 SYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCFVKIPRDKNTI 159
            |||:||.|||..||::.||||.||::|||.|||||:|:|.|||||||:||.||||||:.|..   
Mouse   174 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSP--- 235

  Fly   160 EDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHC-GHPNRYERESGKDSNDGNSSAAEIRS 223
               |..||||||.|...:.:|||.|.|.||:.|.:  | ..|.......|..|..|..|..:...
Mouse   236 ---DKPGKGSYWTLHPDSGNMFENGCYLRRQKRFK--CEKQPGAGGGSGGGGSKGGPESRKDPSG 295

  Fly   224 PSEPLSDFDIFCNERPNYSDRITDLHRQYLSVSLGFNSLFNNEARGLR--PLPEIRECPDDVDAS 286
            |..|.::               :.|||.           .:.:|..|.  |.|.....|..:|.|
Mouse   296 PGNPSAE---------------SPLHRG-----------VHGKASQLEGAPAPGPAASPQTLDHS 334

  Fly   287 SSSSKAMQSSMELHEELHSP-SAFTPPLNRRETSSSGAPVLAEAFNGIKDVVDAPGSSPV--ASS 348
            .:::....|      ||.|| |:..||:      |||...||          ..|.|.|.  .:.
Mouse   335 GATATGGAS------ELKSPASSSAPPI------SSGPGALA----------SVPPSHPAHGLAP 377

  Fly   349 NRSKTTL-----------FTIDNII 362
            :.|:..|           |:|:|::
Mouse   378 HESQLHLKGDPHYSFNHPFSINNLM 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 57/96 (59%)
Foxa1NP_032285.2 Forkhead_N 17..169 CDD:369872 22/124 (18%)
FH_FOXA1 157..268 CDD:410812 62/118 (53%)
Essential for DNA binding 251..288 13/38 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..396 35/174 (20%)
HNF_C 393..457 CDD:430552 3/10 (30%)

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