DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and Foxc2

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_038547.2 Gene:Foxc2 / 14234 MGIID:1347481 Length:494 Species:Mus musculus


Alignment Length:387 Identity:124/387 - (32%)
Similarity:172/387 - (44%) Gaps:101/387 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PSAVG------------GAGMEGLMCGSFSPAFYYQGIDSFLALHNNIWGLPI--SFLHNSHRPE 90
            |:|:|            .||..|   |..||...|.|       |...:|..:  |:....|:|.
Mouse    10 PNALGVVPYLSEQNYYRAAGSYG---GMASPMGVYSG-------HPEQYGAGMGRSYAPYHHQPA 64

  Fly    91 ------KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSLNDCF 149
                  |||:||||||.|||.:||.:::||:|||:||||:||:|||||||||||||||||||:||
Mouse    65 APKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 129

  Fly   150 VKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGHPNRYER--------- 205
            ||:||      |:...||||||.||..:.:|||.|::.|||.|.::.....::.||         
Mouse   130 VKVPR------DDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDKEERAHLKEPPST 188

  Fly   206 -----ESGKDSNDGNSSA-------AEIRSPSEPLSDFDIFCNERPNYSDRITDLHRQYLSVSLG 258
                 .:|....||...|       :|..||:.|:    |...|..:....:....|...|...|
Mouse   189 TAKGAPTGTPVADGPKEAEKKVVVKSEAASPALPV----ITKVETLSPEGALQASPRSASSTPAG 249

  Fly   259 F--NSLFNNEARGLRPLP--------EIRECPDDVDASSSSSKA--MQSSMELHEELHSPSAFTP 311
            .  .||..:.|.....||        .:|..|...|.|.::::|  :...:.|......|:|:|.
Mouse   250 SPDGSLPEHHAAAPNGLPGFSVETIMTLRTSPPGGDLSPAAARAGLVVPPLALPYAAAPPAAYTQ 314

  Fly   312 PLNRRETSSSGA------------------------PVLAEAFNGIKDVVDAPGSSPVASSN 349
            |..:...::..|                        |.|.||   :.|....|| ||:.:.|
Mouse   315 PCAQGLEAAGSAGYQCSMRAMSLYTGAERPAHVCVPPALDEA---LSDHPSGPG-SPLGALN 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 64/102 (63%)
Foxc2NP_038547.2 FH_FOXC1 66..158 CDD:410818 62/97 (64%)
COG5025 71..>251 CDD:227358 82/189 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 7/46 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 6/33 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..422
Blue background indicates that the domain is not in the aligned region.

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