DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and foxc1a

DIOPT Version :9

Sequence 1:NP_001246609.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_571803.1 Gene:foxc1a / 100148408 ZFINID:ZDB-GENE-010302-1 Length:476 Species:Danio rerio


Alignment Length:381 Identity:120/381 - (31%)
Similarity:174/381 - (45%) Gaps:105/381 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SPNPLAP-----------SAVGGAGMEGLMCGSFSPAFYYQGIDSFLALHNNIWGLPISF--LHN 85
            |||.|..           .|..|.|..|:.    :|...|..     |.|:.   .|.|.  .:.
Zfish     9 SPNSLGVVPYISSDQSYYRAAAGGGYTGMP----APMTMYSH-----AAHDQ---YPASMARAYG 61

  Fly    86 SHRPE-------KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNL 143
            .:.|:       |||:||||||.|||.::|::::||:|||:|||::||:||:|||||||||||||
Zfish    62 PYTPQPQPKDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQNSIRHNL 126

  Fly   144 SLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGHPNRYERESG 208
            |||:||||:||      |:...||||||.||..:.:|||.|::.|||.|.::         :::.
Zfish   127 SLNECFVKVPR------DDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKK---------KDAM 176

  Fly   209 KDSNDGNSSAAEIRSP-------------SEPLSDFDIFCNERPNYSDRITDLHRQYLSVSLGFN 260
            ||..|.....|..|..             |:|:...||       .::..|....|.:|.:|.  
Zfish   177 KDKEDRGVKEAPSRQAQPQAREQEQSVPGSQPVRIQDI-------KTENGTSTPPQAVSPTLS-- 232

  Fly   261 SLFNNEARGLRPLPEIRECPDDVDASSSSSK---------AMQSSMELHEELHSPSAFTPPLNRR 316
                       .:|:| |.||...:.||.|.         ::.|:.|.|   |...|....::..
Zfish   233 -----------TVPKI-ESPDSSSSMSSGSPHSIPSTRSLSLDSAGEQH---HQAPAQGFSVDNI 282

  Fly   317 ETSSSGAP---------VLAEAFNGIKDVVD---APGSSPVASSNRSKTTLFTIDN 360
            .||..|:|         ::|.:..||...:.   :|..|.|.||..|:.::.|..|
Zfish   283 MTSLRGSPHSSGELTPSLVAPSRTGITPTLSLNYSPNQSSVYSSPCSQNSISTTSN 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_001246609.1 FH 91..185 CDD:214627 59/93 (63%)
foxc1aNP_571803.1 Forkhead 74..160 CDD:278670 58/91 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..271 25/134 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..303 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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