DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxL1 and foxc1a

DIOPT Version :10

Sequence 1:NP_523912.1 Gene:FoxL1 / 38471 FlyBaseID:FBgn0004895 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_571803.1 Gene:foxc1a / 100148408 ZFINID:ZDB-GENE-010302-1 Length:476 Species:Danio rerio


Alignment Length:381 Identity:120/381 - (31%)
Similarity:174/381 - (45%) Gaps:105/381 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SPNPLAP-----------SAVGGAGMEGLMCGSFSPAFYYQGIDSFLALHNNIWGLPISF--LHN 85
            |||.|..           .|..|.|..|:.    :|...|..     |.|:.   .|.|.  .:.
Zfish     9 SPNSLGVVPYISSDQSYYRAAAGGGYTGMP----APMTMYSH-----AAHDQ---YPASMARAYG 61

  Fly    86 SHRPE-------KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNL 143
            .:.|:       |||:||||||.|||.::|::::||:|||:|||::||:||:|||||||||||||
Zfish    62 PYTPQPQPKDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQNSIRHNL 126

  Fly   144 SLNDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTRRQRHCGHPNRYERESG 208
            |||:||||:||      |:...||||||.||..:.:|||.|::.|||.|.::         :::.
Zfish   127 SLNECFVKVPR------DDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKK---------KDAM 176

  Fly   209 KDSNDGNSSAAEIRSP-------------SEPLSDFDIFCNERPNYSDRITDLHRQYLSVSLGFN 260
            ||..|.....|..|..             |:|:...||       .::..|....|.:|.:|.  
Zfish   177 KDKEDRGVKEAPSRQAQPQAREQEQSVPGSQPVRIQDI-------KTENGTSTPPQAVSPTLS-- 232

  Fly   261 SLFNNEARGLRPLPEIRECPDDVDASSSSSK---------AMQSSMELHEELHSPSAFTPPLNRR 316
                       .:|:| |.||...:.||.|.         ::.|:.|.|   |...|....::..
Zfish   233 -----------TVPKI-ESPDSSSSMSSGSPHSIPSTRSLSLDSAGEQH---HQAPAQGFSVDNI 282

  Fly   317 ETSSSGAP---------VLAEAFNGIKDVVD---APGSSPVASSNRSKTTLFTIDN 360
            .||..|:|         ::|.:..||...:.   :|..|.|.||..|:.::.|..|
Zfish   283 MTSLRGSPHSSGELTPSLVAPSRTGITPTLSLNYSPNQSSVYSSPCSQNSISTTSN 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxL1NP_523912.1 FH_FOX 89..186 CDD:469596 61/103 (59%)
foxc1aNP_571803.1 FH_FOXC1 69..161 CDD:410818 59/97 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..271 25/134 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..303 4/18 (22%)

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