Sequence 1: | NP_001261390.1 | Gene: | scrt / 38469 | FlyBaseID: | FBgn0004880 | Length: | 653 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001153882.1 | Gene: | Scrt2 / 545474 | MGIID: | 2139287 | Length: | 311 | Species: | Mus musculus |
Alignment Length: | 265 | Identity: | 142/265 - (53%) |
---|---|---|---|
Similarity: | 169/265 - (63%) | Gaps: | 47/265 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 364 EQRPASNASSASSNHMPSSPSSNSSSSSSQVQNENSNTTNTNPDGDGCLQDGEHSGASGASAKTV 428
Fly 429 AYTYEAFFVSDGRSKRKHV---ADPAAAA-----------------SGVPTPDQQKTKYTCSECG 473
Fly 474 KQYATSSNLSRHKQTHRSLDSQSAKKCHTCGKAYVSMPALAMHLLTHKLSHSCGVCGKLFSRPWL 538
Fly 539 LQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSVDKNFECKRCHKTFALKSYLNKHLESAC 603
Fly 604 LKDEE 608 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scrt | NP_001261390.1 | zf-C2H2 | 467..489 | CDD:278523 | 17/21 (81%) |
C2H2 Zn finger | 469..489 | CDD:275370 | 17/19 (89%) | ||
C2H2 Zn finger | 500..520 | CDD:275368 | 17/19 (89%) | ||
COG5048 | 520..>617 | CDD:227381 | 68/89 (76%) | ||
C2H2 Zn finger | 526..546 | CDD:275368 | 17/19 (89%) | ||
zf-H2C2_2 | 539..562 | CDD:290200 | 20/22 (91%) | ||
C2H2 Zn finger | 554..574 | CDD:275368 | 19/19 (100%) | ||
zf-C2H2 | 554..574 | CDD:278523 | 19/19 (100%) | ||
zf-H2C2_2 | 566..590 | CDD:290200 | 14/23 (61%) | ||
C2H2 Zn finger | 582..599 | CDD:275368 | 11/16 (69%) | ||
Scrt2 | NP_001153882.1 | SNAG domain. /evidence=ECO:0000250 | 1..20 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 71..90 | 5/18 (28%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 120..156 | 6/35 (17%) | |||
C2H2 Zn finger | 163..183 | CDD:275368 | 17/19 (89%) | ||
COG5048 | <216..>283 | CDD:227381 | 53/66 (80%) | ||
zf-C2H2 | 218..240 | CDD:278523 | 18/21 (86%) | ||
C2H2 Zn finger | 220..240 | CDD:275368 | 17/19 (89%) | ||
zf-H2C2_2 | 233..256 | CDD:290200 | 20/22 (91%) | ||
C2H2 Zn finger | 248..268 | CDD:275368 | 19/19 (100%) | ||
zf-H2C2_2 | 260..284 | CDD:290200 | 14/23 (61%) | ||
C2H2 Zn finger | 276..292 | CDD:275368 | 10/15 (67%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167837660 | |
Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I10448 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2462 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000984 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8872 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107036 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3156 |
SonicParanoid | 1 | 1.000 | - | - | X1445 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.630 |