| Sequence 1: | NP_523911.2 | Gene: | scrt / 38469 | FlyBaseID: | FBgn0004880 | Length: | 653 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_650861.1 | Gene: | trem / 42392 | FlyBaseID: | FBgn0038767 | Length: | 439 | Species: | Drosophila melanogaster |
| Alignment Length: | 324 | Identity: | 79/324 - (24%) |
|---|---|---|---|
| Similarity: | 113/324 - (34%) | Gaps: | 61/324 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 336 HLPTLEAHAHLRSTSSIAELAAAASVVNEQRP--ASNASSASSNHMPSSPSSNSSSSSSQVQNEN 398
Fly 399 SNTTNTNPDGDGCLQDGEHSGASGASAKTVAY-----TYEAFFVSDGRSKRKHVADPAAAASGVP 458
Fly 459 TPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCHTCGKAYVSMPALAMHLLTH--K 521
Fly 522 LSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSVDKNFECKRCH 586
Fly 587 KTFALKSY-LNKHLES-----ACLKDEEELMMSMSLSMHDSNSESGASMASSPPHEFLERVKLE 644 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| scrt | NP_523911.2 | zf-C2H2 | 467..489 | CDD:395048 | 8/21 (38%) |
| C2H2 Zn finger | 469..489 | CDD:275370 | 7/19 (37%) | ||
| C2H2 Zn finger | 500..520 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 526..546 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 539..562 | CDD:463886 | 9/22 (41%) | ||
| C2H2 Zn finger | 554..574 | CDD:275368 | 6/19 (32%) | ||
| zf-C2H2 | 554..574 | CDD:395048 | 6/19 (32%) | ||
| zf-H2C2_2 | 566..590 | CDD:463886 | 8/23 (35%) | ||
| C2H2 Zn finger | 582..599 | CDD:275368 | 7/17 (41%) | ||
| trem | NP_650861.1 | zf-AD | 11..87 | CDD:214871 | |
| COG5048 | <264..411 | CDD:227381 | 45/167 (27%) | ||
| C2H2 Zn finger | 274..294 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 302..322 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 330..350 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 358..378 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 386..406 | CDD:275368 | 9/20 (45%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||