Sequence 1: | NP_001261390.1 | Gene: | scrt / 38469 | FlyBaseID: | FBgn0004880 | Length: | 653 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_650861.1 | Gene: | trem / 42392 | FlyBaseID: | FBgn0038767 | Length: | 439 | Species: | Drosophila melanogaster |
Alignment Length: | 324 | Identity: | 79/324 - (24%) |
---|---|---|---|
Similarity: | 113/324 - (34%) | Gaps: | 61/324 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 336 HLPTLEAHAHLRSTSSIAELAAAASVVNEQRP--ASNASSASSNHMPSSPSSNSSSSSSQVQNEN 398
Fly 399 SNTTNTNPDGDGCLQDGEHSGASGASAKTVAY-----TYEAFFVSDGRSKRKHVADPAAAASGVP 458
Fly 459 TPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCHTCGKAYVSMPALAMHLLTH--K 521
Fly 522 LSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSVDKNFECKRCH 586
Fly 587 KTFALKSY-LNKHLES-----ACLKDEEELMMSMSLSMHDSNSESGASMASSPPHEFLERVKLE 644 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scrt | NP_001261390.1 | zf-C2H2 | 467..489 | CDD:278523 | 8/21 (38%) |
C2H2 Zn finger | 469..489 | CDD:275370 | 7/19 (37%) | ||
C2H2 Zn finger | 500..520 | CDD:275368 | 6/19 (32%) | ||
COG5048 | 520..>617 | CDD:227381 | 32/104 (31%) | ||
C2H2 Zn finger | 526..546 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 539..562 | CDD:290200 | 9/22 (41%) | ||
C2H2 Zn finger | 554..574 | CDD:275368 | 6/19 (32%) | ||
zf-C2H2 | 554..574 | CDD:278523 | 6/19 (32%) | ||
zf-H2C2_2 | 566..590 | CDD:290200 | 8/23 (35%) | ||
C2H2 Zn finger | 582..599 | CDD:275368 | 7/17 (41%) | ||
trem | NP_650861.1 | zf-AD | 11..87 | CDD:214871 | |
COG5048 | <264..411 | CDD:227381 | 45/167 (27%) | ||
C2H2 Zn finger | 274..294 | CDD:275368 | 7/19 (37%) | ||
zf-H2C2_2 | 287..311 | CDD:290200 | 6/26 (23%) | ||
C2H2 Zn finger | 302..322 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 315..338 | CDD:290200 | 6/22 (27%) | ||
C2H2 Zn finger | 330..350 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 345..367 | CDD:290200 | 10/21 (48%) | ||
C2H2 Zn finger | 358..378 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 370..394 | CDD:290200 | 9/24 (38%) | ||
C2H2 Zn finger | 386..406 | CDD:275368 | 9/20 (45%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR23226 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |