DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment scrt and CG4854

DIOPT Version :9

Sequence 1:	NP_001261390.1	Gene:	scrt / 38469	FlyBaseID:	FBgn0004880	Length:	653	Species:	Drosophila melanogaster
Sequence 2:	NP_650860.1	Gene:	CG4854 / 42391	FlyBaseID:	FBgn0038766	Length:	319	Species:	Drosophila melanogaster

Alignment Length:	171	Identity:	55/171 - (32%)
Similarity:	81/171 - (47%)	Gaps:	24/171 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   449 DPAAAA------SGVPTP----DQ---QKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKK- 499
            :||.:|      |..|.|    |:   |...:||:.|...|:....|:.|.:.|      ||||
  Fly   147 EPAISAPEESVYSLSPKPVTFEDEDSGQAASFTCNICNNVYSERVKLTNHMKVH------SAKKP 205

  Fly   500 --CHTCGKAYVSMPALAMHLLTH--KLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKA 560
              |..|.|.:...|.||.|:.||  ...:.|..|...|:.|.....|.|.||.|:||.|..|.::
  Fly   206 HECEICHKRFRQTPQLARHMNTHTGNRPYKCDYCDSRFADPSTRIKHQRIHTNERPYKCEFCSRS 270

  Fly   561 FADRSNLRAHMQTHSVDKNFECKRCHKTFALKSYLNKHLES 601
            |...:.||.|::||:.::.|.|:.|.|:|:...:.|.|.:|
  Fly   271 FGYSNVLRVHLKTHTGERPFSCQYCQKSFSQLHHKNSHEKS 311

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scrt	NP_001261390.1	zf-C2H2	467..489	CDD:278523	6/21 (29%)
		C2H2 Zn finger	469..489	CDD:275370	5/19 (26%)
		C2H2 Zn finger	500..520	CDD:275368	7/19 (37%)
		COG5048	520..>617	CDD:227381	28/84 (33%)
		C2H2 Zn finger	526..546	CDD:275368	6/19 (32%)
		zf-H2C2_2	539..562	CDD:290200	9/22 (41%)
		C2H2 Zn finger	554..574	CDD:275368	6/19 (32%)
		zf-C2H2	554..574	CDD:278523	6/19 (32%)
		zf-H2C2_2	566..590	CDD:290200	9/23 (39%)
		C2H2 Zn finger	582..599	CDD:275368	5/16 (31%)
CG4854	NP_650860.1	zf-AD	12..>57	CDD:285071
		C2H2 Zn finger	180..200	CDD:275368	5/19 (26%)
		zf-H2C2_2	193..217	CDD:290200	10/29 (34%)
		COG5048	201..>258	CDD:227381	20/56 (36%)
		C2H2 Zn finger	208..228	CDD:275368	7/19 (37%)
		zf-H2C2_2	221..244	CDD:290200	7/22 (32%)
		C2H2 Zn finger	236..256	CDD:275368	6/19 (32%)
		zf-H2C2_2	251..273	CDD:290200	10/21 (48%)
		C2H2 Zn finger	264..284	CDD:275368	6/19 (32%)
		zf-H2C2_2	277..301	CDD:290200	10/23 (43%)
		C2H2 Zn finger	292..312	CDD:275368	7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23226
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100