Protein Alignment scrt and sqz

DIOPT Version :9

• Sequence 1: NP_001261390.1
• Gene: scrt / 38469
• FlyBaseID: FBgn0004880
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_524403.1
• Gene: sqz / 42300
• FlyBaseID: FBgn0010768
• Length: 535
• Species: Drosophila melanogaster
• Alignment Length: 418
• Identity: 102/418 - (24%)
• Similarity: 145/418 - (34%)
• Gaps: 166/418 - (39%)

  Fly   246 YRPYSLDDKPAHGYRRRVPAEEDLHAAHAILDLSASTAFHPPTQPHQLQQQ--QQQQQQQHQHHH 308
            |:|:::.:     :|:.| ||.        ||.|.........|...::||  ..||||||.||.
  Fly    39 YKPFNISE-----FRQNV-AER--------LDYSLKNGLVQHQQQMVMEQQPHPDQQQQQHLHHP 89

  Fly   309 SQQQHLAPQQHHYL-----PLQQQQQQQAHHTHLPTLEAHAHLRSTSSIAELAAAASVVNEQRPA 368
            .||||....:..|.     |...:||:|.:..                           |...|.
  Fly    90 QQQQHPPQLKVSYSAPNSPPTPHEQQEQKYDP---------------------------NRSPPR 127

  Fly   369 SNASSASSNHMPSSPSSNSSSSSSQVQNENSNTTNTNPDGDGCLQDGEHSGASGASAKTVAYTYE 433
            ...||||        .|.|:.||.:.::..         |||
  Fly   128 QQMSSAS--------GSGSNGSSPEEESRR---------GDG----------------------- 152

  Fly   434 AFFVSDGRSKRKHVADPAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAK 498
                                       ||.| .|.|..|.|.:|.||.||:|.:.|..:
  Fly   153 ---------------------------DQAK-PYKCGSCSKSFANSSYLSQHTRIHLGI------ 183

  Fly   499 KCHTCGKAYVSMPALAMHLLTHKLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAH--CGKAF 561
                  |.|                 .|.:|.:.|::...||.|:|:|||:|||.|.|  |.|||
  Fly   184 ------KPY-----------------RCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHAGCPKAF 225

  Fly   562 ADRSNLRAHMQTHSVDKNFECKRCHKTFA----LKSYLNKHLESACLKDE----------EELMM 612
            :..|||::|.:.|..||.|:|..|:|.|:    |..::.||.:|..||..          :|..:
  Fly   226 SQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHIPKHKDSKHLKTHICNLCGKSYTQETYL 290

  Fly   613 SMSLSMHDSNSES-----GASMASSPPH 635
            ...|..|...:|.     .|.:|:...|
  Fly   291 QKHLQKHAEKAEKQQHRHTAQVAAHQQH 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scrt	NP_001261390.1	zf-C2H2	467..489	CDD:278523	10/21 (48%)
		C2H2 Zn finger	469..489	CDD:275370	9/19 (47%)
		C2H2 Zn finger	500..520	CDD:275368	2/19 (11%)
		COG5048	520..>617	CDD:227381	38/112 (34%)
		C2H2 Zn finger	526..546	CDD:275368	7/19 (37%)
		zf-H2C2_2	539..562	CDD:290200	15/24 (63%)
		C2H2 Zn finger	554..574	CDD:275368	10/21 (48%)
		zf-C2H2	554..574	CDD:278523	10/21 (48%)
		zf-H2C2_2	566..590	CDD:290200	10/23 (43%)
		C2H2 Zn finger	582..599	CDD:275368	6/20 (30%)
sqz	NP_524403.1	C2H2 Zn finger	160..180	CDD:275368	9/19 (47%)
		zf-H2C2_2	172..197	CDD:290200	9/53 (17%)
		zf-C2H2	186..208	CDD:278523	8/38 (21%)
		C2H2 Zn finger	188..208	CDD:275368	7/19 (37%)
		zf-C2H2_8	191..271	CDD:292531	34/79 (43%)
		zf-H2C2_2	200..227	CDD:290200	16/26 (62%)
		C2H2 Zn finger	216..238	CDD:275368	10/21 (48%)
		C2H2 Zn finger	246..266	CDD:275368	5/19 (26%)
		C2H2 Zn finger	277..297	CDD:275368	2/19 (11%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45457067
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930