Protein Alignment scrt and gl

DIOPT Version :10

• Sequence 1: NP_523911.2
• Gene: scrt / 38469
• FlyBaseID: FBgn0004880
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_001262708.1
• Gene: gl / 42210
• FlyBaseID: FBgn0004618
• Length: 679
• Species: Drosophila melanogaster
• Alignment Length: 571
• Identity: 136/571 - (23%)
• Similarity: 197/571 - (34%)
• Gaps: 188/571 - (32%)

  Fly   181 GNGSGDQHLAAYQTPPSSTTSSPSCSPSGAGDRYSPLSSGQTSSERKCFSSTGATLSLPPKKKDI 245
            |.|.|..|:....|||:|:.:..|.:.:|.|   |..:.|..|::....:..|    |||
  Fly   101 GVGIGGGHIQISTTPPASSGNGSSNNGAGGG---SSGNHGYWSTDEMASTFPG----LPP----- 153

  Fly   246 YRPYSLDDKPAHGYRRRVPAEEDLHAAHAILDLSASTAFHPPTQPHQL--------QQQQQQQQQ 302
                 ||..|........|.....:.|......:||.::  ...|||:        ..|...|.|
  Fly   154 -----LDIDPLPSLFPFSPCGASYNFAAGNPHQAASLSY--TVHPHQMLISPNSHNHGQMHSQHQ 211

  Fly   303 QHQHHHSQQQHLAPQQHHYLPLQQQQQQQAHHTHLPTLEAHA--HLRSTSSIAELAAAASVVNEQ 365
            ||||                   ||.|.||.|.....|::..  ::.|..|...:|.|||...|
  Fly   212 QHQH-------------------QQSQVQASHVGNSLLQSSGGNNIGSNGSAGGVANAASCYYE- 256

  Fly   366 RPASNASSASSNHMPSSPSSNSSSSSSQVQNENSNTTNTNPDGDG--------CLQ------DGE 416
                  :||.:...|..|::....|.|  .|.:.|.|..:..|.|        |.|      ...
  Fly   257 ------TSAGTAAPPPPPAAAMYPSMS--VNVSMNMTMHHGYGAGDAGGVPMQCSQMNWTPPSNS 313

  Fly   417 HSGASGASAKTVAY-------------TYEAFFVSDGRSK--------------RKHVADPAAAA 454
            .|.|:.|:|..|.|             ||.  |.:|.|:.              .|....|.|.:
  Fly   314 TSAAAAAAAVNVLYPPLLSPGHYPASATYS--FTADFRAPAPTGLGALPPLTVGEKESPSPPANS 376

  Fly   455 S------------GVPTPDQQKTKY------------------------------------TCSE 471
            |            |...|.:..|.|                                    .|..
  Fly   377 SLAGYYPTGVGNQGYTPPHKSPTSYQAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEMKPNLCRL 441

  Fly   472 CGKQYATSSNLSRHKQTHRSLDSQSAKKCHTCGKAYVSMPALAMHLLTH--KLSHSCGVCGKLFS 534
            |||.||..|.|..|.:||   ..:...:|..|.|::.....|..|:.||  :....|.:|.:.||
  Fly   442 CGKTYARPSTLKTHLRTH---SGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFS 503

  Fly   535 RPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSVDKNFECKRCHKTFALKSYLNKHL 599
            :...:..|:|:|:||:||.|:.|.|:|:|.|.|..|::.||.:|.::||.|...|:....||:|:
  Fly   504 QSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHM 568

  Fly   600 ESACLKDEEELMMSMSLSMHDSNSESGASMASSPPHEFLERVKLEGSGGAT 650
            .                 :|.:|:.|                  .||.|||
  Fly   569 R-----------------VHGNNNSS------------------NGSNGAT 584

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scrt	NP_523911.2	zf-C2H2	467..489	CDD:395048	10/57 (18%)
		C2H2 Zn finger	469..489	CDD:275370	9/19 (47%)
		C2H2 Zn finger	500..520	CDD:275368	5/19 (26%)
		C2H2 Zn finger	526..546	CDD:275368	6/19 (32%)
		zf-H2C2_2	539..562	CDD:463886	10/22 (45%)
		C2H2 Zn finger	554..574	CDD:275368	8/19 (42%)
		zf-C2H2	554..574	CDD:395048	8/19 (42%)
		zf-H2C2_2	566..590	CDD:463886	8/23 (35%)
		C2H2 Zn finger	582..599	CDD:275368	6/16 (38%)
gl	NP_001262708.1	COG5048	<426..571	CDD:227381	47/164 (29%)
		C2H2 Zn finger	439..459	CDD:275368	9/19 (47%)
		C2H2 Zn finger	467..487	CDD:275368	5/19 (26%)
		C2H2 Zn finger	495..515	CDD:275368	6/19 (32%)
		C2H2 Zn finger	523..543	CDD:275368	8/19 (42%)
		C2H2 Zn finger	551..571	CDD:275368	7/36 (19%)