| Sequence 1: | NP_001261390.1 | Gene: | scrt / 38469 | FlyBaseID: | FBgn0004880 | Length: | 653 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001262343.1 | Gene: | rn / 40879 | FlyBaseID: | FBgn0267337 | Length: | 952 | Species: | Drosophila melanogaster |
| Alignment Length: | 668 | Identity: | 155/668 - (23%) |
|---|---|---|---|
| Similarity: | 247/668 - (36%) | Gaps: | 198/668 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 76 ADAAAAAATSSEAATSHSSNSSNMEASATTTTSKCWGPSSPTAGTTAPSPP---------PHSPE 131
Fly 132 AATRVAGNVYNGYTRELS-PLHYTAYLPRMESEITVIRAAATALVAARTSGNGSGDQHLAAYQTP 195
Fly 196 PSSTTSSPSCSPSGAGDRYSPLSSGQTSSERKCFSSTGATLSLPPKKKDIY-------------- 246
Fly 247 --RPYSLDD-KPAHGYRRRVPAEEDLHAAHAILDLSASTAFHP--------PTQ--PHQLQQQQQ 298
Fly 299 QQQQQHQHH----------------HSQ------------QQHLAPQQHHYLPLQQQQQQQA--- 332
Fly 333 HHTHLP--------TLEAHA-------HLRSTSSIAELAAAASVVNEQRPASNASSASSNHMPSS 382
Fly 383 PSSNSSSSSSQVQNENSNTTNTNPDGDGCLQDGEHSGASGASAKTVAYTYEAFFVSDGRSKRKHV 447
Fly 448 ADPAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAK--KCHTCGKAYVSM 510
Fly 511 PALAMHLLTHK--LSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAH--CGKAFADRSNLRAHM 571
Fly 572 QTHSVDKNFECKRCHKTF----ALKSYLNKHLESACLKDE----------EELMMSMSLSMHDSN 622
Fly 623 SE--------SGASMASS 632 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| scrt | NP_001261390.1 | zf-C2H2 | 467..489 | CDD:278523 | 6/21 (29%) |
| C2H2 Zn finger | 469..489 | CDD:275370 | 5/19 (26%) | ||
| C2H2 Zn finger | 500..520 | CDD:275368 | 6/19 (32%) | ||
| COG5048 | 520..>617 | CDD:227381 | 40/114 (35%) | ||
| C2H2 Zn finger | 526..546 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 539..562 | CDD:290200 | 15/24 (63%) | ||
| C2H2 Zn finger | 554..574 | CDD:275368 | 10/21 (48%) | ||
| zf-C2H2 | 554..574 | CDD:278523 | 10/21 (48%) | ||
| zf-H2C2_2 | 566..590 | CDD:290200 | 11/27 (41%) | ||
| C2H2 Zn finger | 582..599 | CDD:275368 | 6/20 (30%) | ||
| rn | NP_001262343.1 | C2H2 Zn finger | 490..510 | CDD:275368 | 5/19 (26%) |
| C2H2 Zn finger | 519..539 | CDD:275368 | 6/19 (32%) | ||
| zf-H2C2_2 | 531..556 | CDD:290200 | 6/24 (25%) | ||
| zf-C2H2 | 545..567 | CDD:278523 | 7/21 (33%) | ||
| C2H2 Zn finger | 547..567 | CDD:275368 | 7/19 (37%) | ||
| zf-C2H2_8 | 550..630 | CDD:292531 | 35/79 (44%) | ||
| zf-H2C2_2 | 559..586 | CDD:290200 | 16/26 (62%) | ||
| C2H2 Zn finger | 575..597 | CDD:275368 | 10/21 (48%) | ||
| C2H2 Zn finger | 605..625 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 636..656 | CDD:275368 | 1/19 (5%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR23226 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||