DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment scrt and snai1

DIOPT Version :9

Sequence 1:	NP_001261390.1	Gene:	scrt / 38469	FlyBaseID:	FBgn0004880	Length:	653	Species:	Drosophila melanogaster
Sequence 2:	NP_989267.1	Gene:	snai1 / 394880	XenbaseID:	XB-GENE-479970	Length:	262	Species:	Xenopus tropicalis

Alignment Length:	226	Identity:	95/226 - (42%)
Similarity:	125/226 - (55%)	Gaps:	47/226 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   380 PSSPSSNSSSSSSQVQNENSNTTNTNPDGDGCLQDGEHSGASGASAKTVAYTYEAFFVSDGRSKR 444
            |.||||:..||...     ..|:.::.|.:|              .||
Frog    78 PISPSSSDDSSKPL-----DLTSFSSEDDEG--------------GKT----------------- 106

  Fly   445 KHVADPAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAK--KCHTCGKAY 507
               :||.:.||..    .:..|:.|::|.|.|:|.:.||:|||.|  .|||:.|  .|..|.|.|
Frog   107 ---SDPPSPASSA----TEAEKFQCNQCSKSYSTFAGLSKHKQLH--CDSQARKSFSCKYCEKEY 162

  Fly   508 VSMPALAMHLLTHKLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQ 572
            ||:.||.||:.:|.|...|.:|||.||||||||||:|:||||||:.|.||.:|||||||||||:|
Frog   163 VSLGALKMHIRSHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCTHCNRAFADRSNLRAHLQ 227

  Fly   573 THSVDKNFECKRCHKTFALKSYLNKHLESAC 603
            |||..|.::||.|.:||:..|.|:||.|:.|
Frog   228 THSDVKKYQCKNCSRTFSRMSLLHKHEETGC 258

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scrt	NP_001261390.1	zf-C2H2	467..489	CDD:278523	10/21 (48%)
		C2H2 Zn finger	469..489	CDD:275370	10/19 (53%)
		C2H2 Zn finger	500..520	CDD:275368	10/19 (53%)
		COG5048	520..>617	CDD:227381	53/84 (63%)
		C2H2 Zn finger	526..546	CDD:275368	15/19 (79%)
		zf-H2C2_2	539..562	CDD:290200	15/22 (68%)
		C2H2 Zn finger	554..574	CDD:275368	15/19 (79%)
		zf-C2H2	554..574	CDD:278523	15/19 (79%)
		zf-H2C2_2	566..590	CDD:290200	14/23 (61%)
		C2H2 Zn finger	582..599	CDD:275368	8/16 (50%)
snai1	NP_989267.1	DUF4764	<97..>156	CDD:318226	24/98 (24%)
		C2H2 Zn finger	124..144	CDD:275370	10/19 (53%)
		C2H2 Zn finger	155..175	CDD:275368	10/19 (53%)
		COG5048	<176..>252	CDD:227381	48/75 (64%)
		C2H2 Zn finger	181..201	CDD:275368	15/19 (79%)
		C2H2 Zn finger	209..229	CDD:275368	15/19 (79%)
		C2H2 Zn finger	237..253	CDD:275368	7/15 (47%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910