Protein Alignment scrt and CG11906

DIOPT Version :9

• Sequence 1: NP_001261390.1
• Gene: scrt / 38469
• FlyBaseID: FBgn0004880
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_611402.2
• Gene: CG11906 / 37209
• FlyBaseID: FBgn0034425
• Length: 634
• Species: Drosophila melanogaster
• Alignment Length: 669
• Identity: 127/669 - (18%)
• Similarity: 202/669 - (30%)
• Gaps: 223/669 - (33%)

  Fly    24 NQQQQQEQSAPNSPRE---------------------LEELHLKSRRSTLDDDEEIDVVGDKFLI 67
            :.:|.|:::...:.||                     |...|:..||.:.|.....||:
  Fly    23 DNRQDQDENHVGAEREAEANDANCTVCGAAKASALLDLRSNHVMQRRLSRDWKIHADVI------ 81

  Fly    68 KLEKQRTTADAAAAAAT-----SSEAATSHSSNSSNMEASATTTTSKCWGPSSPTAGTTAPSPPP 127
                 |:|..|......     .||...|.......::.|...||.         ..||..||..
  Fly    82 -----RSTLKAICVECVCKLNMHSEVTRSLMQRMQRLQRSGGETTK---------VTTTTTSPSQ 132

  Fly   128 HSPEAATRVAGNVYNGYTRELSPLHYTAYLPRMESEITVIRAAATALVAARTSGNGSGDQHLAAY 192
            |||                           |..::|:      :|.|:.::.....||
  Fly   133 HSP---------------------------PIADAEV------STTLIESQEEVAHSG------- 157

  Fly   193 QTPPSSTTSSPSCSPSG---AGDRYSPLSSGQTSSER----------KCFSSTGATLSLPPKKKD 244
                .|..|..|||...   |...||| |:.:|..:.          :|.....|..     ::|
  Fly   158 ----QSVRSRSSCSVLEVYLAQQPYSP-SAKETEEKHAEGWKWRTRLECHECGRAYF-----RRD 212

  Fly   245 IYRPYSLDDKPAHGYRRRVP------------AEEDLHA-AHAILDLSASTAFHPPTQPHQLQQQ 296
            .|..:.   :.....||:.|            |..|..| :.||.........|...:...|..:
  Fly   213 YYAQHL---RRCSKTRRKQPRPSRVKCRVLNEASYDEEAPSRAIRSSRIYYCRHCDAEFETLISK 274

  Fly   297 QQQQQQQHQHHHSQQQHLAPQQHHYLPLQQQQQQQAHHTHLPTLEAHAHLRSTSSIAELAAAASV 361
            :|.::.:||..:       |.......|..:.:.:.|||                |.:....|..
  Fly   275 RQHERMKHQQRY-------PCDLCEAQLDTKYEWEMHHT----------------ICQAKQEALA 316

  Fly   362 VNEQRPASNASSASSNHMPSSPSSNSSSSS--------SQVQNENSNTTNTNPDGDGCLQDGE-- 416
            :.||:.|  ..:..::.:|.:.|..|.|.:        ...:.|..........|...|::||
  Fly   317 IVEQQEA--GQTVMTSRVPRACSMRSRSRACSEAWDRYDMDEEEEDEEDEEIESGGEELEEGEED 379

  Fly   417 ----------------HSGASGASAKTVAYTYEAFFVSDGRSKRKHVADPAAAASGVPTPDQQ-- 463
                            ||.::..||..::..|     .|......|:           |.|::
  Fly   380 AMYARRMNFTGDWIVNHSRSNSNSAGNLSLLY-----GDYGMVETHM-----------TTDKEYD 428

  Fly   464 -------KTK-----YTC--SECGKQYATSSNLSRHK-QTHRSLDSQSAKKCHTCGKAYVSMPAL 513
                   ||:     :||  .:||.|..|...|.:|. ..|..:   |...||.||..:.|...|
  Fly   429 LYLLDLLKTQVRLKSFTCFTPDCGYQTDTLVALMKHDYMEHWKM---SWFYCHKCGDVFTSKVFL 490

  Fly   514 AMHL-LTHKLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQT--H- 574
            ..|: |.::..:.|..|.:.|.....|..|.:.|.....|.|..|...|...:.|.||.:.  |
  Fly   491 DYHMHLQNRGLYICHKCREEFELQHQLDRHFQLHRKGINYHCNFCRLEFLSEAKLLAHCKKLGHS 555

  Fly   575 -------SVDKNFECKRCH 586
                   |:|::.....||
  Fly   556 PNDEPLISIDRSLSIVNCH 574

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scrt	NP_001261390.1	zf-C2H2	467..489	CDD:278523	8/24 (33%)
		C2H2 Zn finger	469..489	CDD:275370	7/22 (32%)
		C2H2 Zn finger	500..520	CDD:275368	8/20 (40%)
		COG5048	520..>617	CDD:227381	18/77 (23%)
		C2H2 Zn finger	526..546	CDD:275368	5/19 (26%)
		zf-H2C2_2	539..562	CDD:290200	6/22 (27%)
		C2H2 Zn finger	554..574	CDD:275368	6/21 (29%)
		zf-C2H2	554..574	CDD:278523	6/21 (29%)
		zf-H2C2_2	566..590	CDD:290200	8/31 (26%)
		C2H2 Zn finger	582..599	CDD:275368	2/5 (40%)
CG11906	NP_611402.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45457095
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930