DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrt and Zfp324

DIOPT Version :9

Sequence 1:NP_001261390.1 Gene:scrt / 38469 FlyBaseID:FBgn0004880 Length:653 Species:Drosophila melanogaster
Sequence 2:XP_344863.6 Gene:Zfp324 / 365192 RGDID:1306631 Length:581 Species:Rattus norvegicus


Alignment Length:438 Identity:107/438 - (24%)
Similarity:167/438 - (38%) Gaps:87/438 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 PSSTTSSPSCSPSGAG-DRYSPLSSGQTSSERKCF-SSTGATLSLPPKKKDIYRP----YSLDDK 254
            |:.|.:.|     |.| .|.|.|.|..::.:|... :|.|||...|.:......|    |. |.|
  Rat    92 PNRTIAGP-----GRGTHRRSSLGSNYSARDRHVSGASPGATCDRPVRISTSLLPPAGAYP-DAK 150

  Fly   255 PAHGYRRRVPAEED-------LHAAHAILDLSASTAFHPPTQPHQLQQQQQQQQQQHQHHHSQQQ 312
            ...|::...|:.:.       ::....:|..|:|.|    |...:|.......:.......:...
  Rat   151 ILEGHQSACPSLQKKPTGVSVIYWEQLLLGSSSSEA----TVSLRLTSPVGVPENGSSRVKAFSD 211

  Fly   313 HLAPQQHHYLPLQQQQQQQAHHTHLPTLEAHAHLRSTSSIAELAAAASVVNEQRPASNASSASSN 377
            .|||.:...:..||:.:.|.:..           |:..||.:|..|     |:....:.:...|.
  Rat   212 LLAPGKQLRVAEQQKPEMQLNPG-----------RTFQSIPDLHEA-----EEGHGISGACHESQ 260

  Fly   378 HMPSSPSSNSSSSSSQVQNENSNTTNTNP---DGD------GC----LQDGE-------HSGASG 422
            ..||.|       .:.:.:|........|   .||      .|    ::..:       |:|.. 
  Rat   261 GDPSVP-------EAPIWDELGEALQAGPGLFSGDKPFECRACNKVFVKSSDLLKHLRTHTGER- 317

  Fly   423 ASAKTVAYTYEAFFVSDGRSKRKHVADPAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQ 487
                    .||........|:..|:.......||       :|.|.|..|.|.:..||:|.||::
  Rat   318 --------PYECAQCGKAFSQTSHLTQHQRIHSG-------ETPYVCMVCSKAFRHSSSLVRHQR 367

  Fly   488 THRSLDSQSAKKCHTCGKAYVSMPALAMHLLTHK--LSHSCGVCGKLFSRPWLLQGHLRSHTGEK 550
            .|   ..:....|:.||||:.....|:.|...|.  ..::|..||:.|.|...|..|.|:|||||
  Rat   368 IH---TVEKTFHCNECGKAFSHGSNLSQHRKIHAGGRPYACAQCGRRFCRNSHLIQHERTHTGEK 429

  Fly   551 PYGCAHCGKAFADRSNLRAHMQTHSVDKNFECKRCHKTFALKSYLNKH 598
            ||.|:.||.||:..|:|..|.:.|:.:|.|.|.:|.:.|:..|.|.:|
  Rat   430 PYACSLCGAAFSQGSSLFKHQRVHTGEKPFSCPQCGRAFSHSSNLTQH 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scrtNP_001261390.1 zf-C2H2 467..489 CDD:278523 9/21 (43%)
C2H2 Zn finger 469..489 CDD:275370 8/19 (42%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
COG5048 520..>617 CDD:227381 33/81 (41%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 539..562 CDD:290200 14/22 (64%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
zf-C2H2 554..574 CDD:278523 8/19 (42%)
zf-H2C2_2 566..590 CDD:290200 7/23 (30%)
C2H2 Zn finger 582..599 CDD:275368 6/17 (35%)
Zfp324XP_344863.6 KRAB 31..91 CDD:214630
KRAB 31..70 CDD:279668
zf-C2H2 291..313 CDD:278523 1/21 (5%)
C2H2 Zn finger 293..313 CDD:275368 1/19 (5%)
zf-H2C2_2 305..330 CDD:290200 4/33 (12%)
C2H2 Zn finger 321..341 CDD:275368 2/19 (11%)
COG5048 <328..533 CDD:227381 55/160 (34%)
zf-H2C2_2 333..358 CDD:290200 8/31 (26%)
C2H2 Zn finger 349..369 CDD:275368 8/19 (42%)
zf-H2C2_2 361..386 CDD:290200 9/27 (33%)
C2H2 Zn finger 377..397 CDD:275368 7/19 (37%)
zf-C2H2 403..425 CDD:278523 8/21 (38%)
C2H2 Zn finger 405..425 CDD:275368 8/19 (42%)
zf-H2C2_2 417..442 CDD:290200 15/24 (63%)
C2H2 Zn finger 433..453 CDD:275368 8/19 (42%)
zf-H2C2_2 445..470 CDD:290200 8/24 (33%)
C2H2 Zn finger 461..481 CDD:275368 6/17 (35%)
zf-H2C2_2 473..497 CDD:290200 2/5 (40%)
C2H2 Zn finger 489..509 CDD:275368
zf-H2C2_2 502..524 CDD:290200
C2H2 Zn finger 517..537 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4772
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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