| Sequence 1: | NP_001261390.1 | Gene: | scrt / 38469 | FlyBaseID: | FBgn0004880 | Length: | 653 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001163089.2 | Gene: | rgr / 35843 | FlyBaseID: | FBgn0267792 | Length: | 889 | Species: | Drosophila melanogaster |
| Alignment Length: | 732 | Identity: | 145/732 - (19%) |
|---|---|---|---|
| Similarity: | 241/732 - (32%) | Gaps: | 187/732 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 18 RTEDTSNQQQQQ-EQSAPNSPRE--LEELHLKSRRSTLDDDEEIDVVGDKFLIKLEKQRT-TADA 78
Fly 79 AAAAATSSEAATSHSSNSSNMEASAT-----------TTTSKCWGPSSPTAGTTAPSPPPHSPEA 132
Fly 133 ATRVAGNVYNGYTRELSPLHYTAYLP----RMESEITVIRAAATALVAARTSGNGSGDQHLAAYQ 193
Fly 194 TPPSSTTSSPSC-SPSGAGDRYSPLSSGQTSSERKCFSSTGATLSLPPKKKDIYR---PYSLDD- 253
Fly 254 -------KPAHGYRRRVPAEEDLHAAHAILDLSASTAFHPPTQPHQLQQQQQQQ----------Q 301
Fly 302 QQHQHHHSQQQHLAPQQHHYLP----------LQQQQQQQAHHTHLPTLEAHAHLRSTSSIAELA 356
Fly 357 AAASVV--NEQRPASNASSASSNHMPSS------------------PSSNSSSSSSQVQNENSNT 401
Fly 402 TNTNPDGDGCLQDGEHSGASGASAKTVAYTYEAFFVSDGRSKRKHVADPAAAASGVPT------- 459
Fly 460 -PDQQKTKYTCSECGKQYATSSNLSRHKQTHRSLDSQSAKKCHTCGKAYVSMPA-LAMHLLTHK- 521
Fly 522 -LSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSVDKNFECKRC 585
Fly 586 HKTFALKS----YLN------KHLESAC---------LKDEEELMMSMSLSMHDSNSESGASMAS 631
Fly 632 SPPHEFLERVKLEGSGG 648 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| scrt | NP_001261390.1 | zf-C2H2 | 467..489 | CDD:278523 | 4/21 (19%) |
| C2H2 Zn finger | 469..489 | CDD:275370 | 4/19 (21%) | ||
| C2H2 Zn finger | 500..520 | CDD:275368 | 8/20 (40%) | ||
| COG5048 | 520..>617 | CDD:227381 | 38/117 (32%) | ||
| C2H2 Zn finger | 526..546 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 539..562 | CDD:290200 | 13/22 (59%) | ||
| C2H2 Zn finger | 554..574 | CDD:275368 | 7/19 (37%) | ||
| zf-C2H2 | 554..574 | CDD:278523 | 7/19 (37%) | ||
| zf-H2C2_2 | 566..590 | CDD:290200 | 6/23 (26%) | ||
| C2H2 Zn finger | 582..599 | CDD:275368 | 7/26 (27%) | ||
| rgr | NP_001163089.2 | MADF_DNA_bdg | 335..420 | CDD:287510 | 19/106 (18%) |
| MADF_DNA_bdg | 465..551 | CDD:287510 | 15/102 (15%) | ||
| MADF_DNA_bdg | 595..682 | CDD:287510 | 13/100 (13%) | ||
| C2H2 Zn finger | 691..711 | CDD:275368 | 4/19 (21%) | ||
| C2H2 Zn finger | 719..739 | CDD:275368 | 8/20 (40%) | ||
| zf-H2C2_2 | 731..756 | CDD:290200 | 8/24 (33%) | ||
| COG5048 | 742..>824 | CDD:227381 | 29/81 (36%) | ||
| C2H2 Zn finger | 747..767 | CDD:275368 | 7/19 (37%) | ||
| zf-H2C2_2 | 763..784 | CDD:290200 | 14/20 (70%) | ||
| C2H2 Zn finger | 775..795 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 803..818 | CDD:275368 | 5/14 (36%) | ||
| C2H2 Zn finger | 831..851 | CDD:275368 | 4/19 (21%) | ||
| C2H2 Zn finger | 859..877 | CDD:275368 | 4/17 (24%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45457100 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.840 | |||||