Protein Alignment scrt and wor

DIOPT Version :10

• Sequence 1: NP_523911.2
• Gene: scrt / 38469
• FlyBaseID: FBgn0004880
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_476601.1
• Gene: wor / 34906
• FlyBaseID: FBgn0001983
• Length: 548
• Species: Drosophila melanogaster
• Alignment Length: 622
• Identity: 162/622 - (26%)
• Similarity: 243/622 - (39%)
• Gaps: 168/622 - (27%)

  Fly    84 TSSEAATSHSSNSSNME-ASATTTTSKCWGPSSPTAGTTAPSPPPHSPEAATR-----------V 136
            :|.|...||.....::. |||.......|...|      .|.|.|...|...|           :
  Fly    21 SSPEDHLSHDEGPVDLSVASAAVPMEPHWMAKS------EPEPQPVPTELRRRFDAAMNQTKEQL 79

  Fly   137 AGNVYNGYTRELSPLHYTAYLPRMESEITVIRAAATALVAARTSGNGSGDQHLAAYQTPPSSTTS 201
            |..::. .|||::         |...::......|.:|  ||.   |.|:     ::.||.....
  Fly    80 ARRIWE-ETREIA---------RAFPDVFTREEIAKSL--ARL---GYGE-----FELPPEEEVM 124

  Fly   202 SPSCSPSGAGDRYSPLSSGQTSSERKCFSSTGATLSLPPKKKDIYRPYSLDDKPAHGYR----RR 262
            .|...|    :::.||        |....::...:...|..::.:        |...|.    :.
  Fly   125 EPEPEP----EQHLPL--------RYTRDASPTIIKAEPSDEEQF--------PLRNYNNNLLKS 169

  Fly   263 VPAEEDL----HAAHAILDLSASTAFHPP----TQPHQLQQQQQQQQQQHQHHHS------QQQH 313
            :...||.    :....|..:.:...|:||    .:|..|...|::...::.:..:      ..||
  Fly   170 IAEYEDCMKMQNIKEEIPPIPSPQLFYPPPTPLAEPEDLSVTQRRVLSENMNLQNVARALLSMQH 234

  Fly   314 LAPQQHHYLPLQQQQQQQAHHTHLPTLEAHAHLRSTSSIAE--------LAAAASVVNEQRPASN 370
            :|| ||...|:..::.|:....:      ...::|::.:..        .|..|.:|..|:
  Fly   235 MAP-QHAPPPIDMEEDQENQDIN------QLKIKSSNDLYYQCQQCNKCYATYAGLVKHQQ---- 288

  Fly   371 ASSASSNHMPSSPSSNSSSSSSQVQNENSNTTNTNPDGDGCLQDGEHSGASGASAKTVAYTYEAF 435
                                :...::.......:.|.|.|.:.|........|||     ..:|.
  Fly   289 --------------------THAYESTEYKIIRSQPGGSGAIVDQTEFCTDQASA-----LIQAA 328

  Fly   436 FVSDGRSKRKHVADPAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTH-RSLDSQSAKK 499
            .|:..:|.:|.|        |||       :|.|.:|||.|:|.|.||:|:|.| .|.:....||
  Fly   329 NVASAQSMQKPV--------GVP-------RYHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVKK 378

  Fly   500 ---CHTCGKAYVSMPALAMHLLTHKLSHSCGVCGKLFSRPWLLQGHLRSHTGEKPYGCAHCGKAF 561
               |..|.|.|||:.||.||:.||.|...|.:|||.||||||||||:|:||||||:.|.||.:||
  Fly   379 VFSCKNCDKTYVSLGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAF 443

  Fly   562 ADRSNLRAHMQTHSVDKNFECKRCHKTFALKSYLNKHLESACLK-------------DEEELMMS 613
            ||||||||||||||..|.:.|..|.|:|:..|.|.|||:|.|..             |:::|...
  Fly   444 ADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSGGPSGSGGGFDQQQLQQH 508

  Fly   614 MSL--------------SMHDSN--SESGASMASSPP 634
            :.:              |:..||  .|.|......||
  Fly   509 LQVYEEGHNPHQLYYAGSVGSSNGEEEEGGEYQMQPP 545

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scrt	NP_523911.2	zf-C2H2	467..489	CDD:395048	12/21 (57%)
		C2H2 Zn finger	469..489	CDD:275370	11/19 (58%)
		C2H2 Zn finger	500..520	CDD:275368	10/19 (53%)
		C2H2 Zn finger	526..546	CDD:275368	15/19 (79%)
		zf-H2C2_2	539..562	CDD:463886	15/22 (68%)
		C2H2 Zn finger	554..574	CDD:275368	16/19 (84%)
		zf-C2H2	554..574	CDD:395048	16/19 (84%)
		zf-H2C2_2	566..590	CDD:463886	14/23 (61%)
		C2H2 Zn finger	582..599	CDD:275368	7/16 (44%)
wor	NP_476601.1	C2H2 Zn finger	270..290	CDD:275368	4/43 (9%)
		C2H2 Zn finger	317..334	CDD:275368	5/21 (24%)
		zf-C2H2	345..367	CDD:395048	12/21 (57%)
		C2H2 Zn finger	347..367	CDD:275368	11/19 (58%)
		zf-C2H2	380..402	CDD:395048	10/21 (48%)
		C2H2 Zn finger	382..402	CDD:275368	10/19 (53%)
		zf-C2H2	406..428	CDD:395048	15/21 (71%)
		C2H2 Zn finger	408..428	CDD:275368	15/19 (79%)
		zf-C2H2	434..456	CDD:395048	16/21 (76%)
		C2H2 Zn finger	436..456	CDD:275368	16/19 (84%)
		C2H2 Zn finger	464..481	CDD:275368	7/16 (44%)