Sequence 1: | NP_001261390.1 | Gene: | scrt / 38469 | FlyBaseID: | FBgn0004880 | Length: | 653 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245993.1 | Gene: | crol / 34592 | FlyBaseID: | FBgn0020309 | Length: | 962 | Species: | Drosophila melanogaster |
Alignment Length: | 695 | Identity: | 142/695 - (20%) |
---|---|---|---|
Similarity: | 247/695 - (35%) | Gaps: | 171/695 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 TADAAAAAATSSEAATSHSSNSSNMEASATTTTSKCWGPSSPTAGTTAPSPPPHSPEAATRVAGN 139
Fly 140 VYNGYTRELSPLHYTA---YLPRMESEITVIRAAATALVAARTSGNG--SGDQHLAAYQTPPSST 199
Fly 200 TSSPSCSPSGA--GDRYSPLSSGQTSSERK----------------------------------C 228
Fly 229 FS--STGATLSLPPKKKDIYRPYS-------------LDDK-PAH----GYRRRVPAEEDLHAAH 273
Fly 274 AILDLSASTAFHPPTQPHQ--LQQQQQQQQQQHQHHHSQQQHLAPQQHHYLPLQQQQQQQ-AHHT 335
Fly 336 HLPTLEAHAHLRSTSSIAELAAAASVVNEQRPASNASSASSNHM----PSSP-----SSNSSSSS 391
Fly 392 SQVQNENSNTTNTNPDG-DGCLQD-----------GEHSGASGASAK--TVAYTYEAFFVSDGR- 441
Fly 442 ----------------SKRKHVADPAAAASGVPTPDQQKTKYTCSECGKQYATSSNLSRHKQTHR 490
Fly 491 SLDSQSAKKCHTCGKAYVSMPALAMHLLTHKLS--HSCGVCGKLFSRPWLLQGHL-RSHTGEKPY 552
Fly 553 GCAHCGKAFADRSNLRAHMQTHS----VDKNFECKRCHKTFALKSYLNKHLES-------ACLKD 606
Fly 607 EEELMMSMSLSMHDSNSESGASMASSPPHE-------FLERVKLE 644 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scrt | NP_001261390.1 | zf-C2H2 | 467..489 | CDD:278523 | 6/21 (29%) |
C2H2 Zn finger | 469..489 | CDD:275370 | 6/19 (32%) | ||
C2H2 Zn finger | 500..520 | CDD:275368 | 5/19 (26%) | ||
COG5048 | 520..>617 | CDD:227381 | 35/110 (32%) | ||
C2H2 Zn finger | 526..546 | CDD:275368 | 9/20 (45%) | ||
zf-H2C2_2 | 539..562 | CDD:290200 | 11/23 (48%) | ||
C2H2 Zn finger | 554..574 | CDD:275368 | 8/19 (42%) | ||
zf-C2H2 | 554..574 | CDD:278523 | 8/19 (42%) | ||
zf-H2C2_2 | 566..590 | CDD:290200 | 8/27 (30%) | ||
C2H2 Zn finger | 582..599 | CDD:275368 | 6/16 (38%) | ||
crol | NP_001245993.1 | C2H2 Zn finger | 223..243 | CDD:275368 | 4/19 (21%) |
C2H2 Zn finger | 251..271 | CDD:275368 | 0/19 (0%) | ||
C2H2 Zn finger | 279..299 | CDD:275368 | 4/19 (21%) | ||
COG5048 | 300..723 | CDD:227381 | 87/452 (19%) | ||
C2H2 Zn finger | 307..327 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 335..355 | CDD:275368 | 2/23 (9%) | ||
C2H2 Zn finger | 363..383 | CDD:275368 | 1/19 (5%) | ||
C2H2 Zn finger | 391..411 | CDD:275368 | 2/26 (8%) | ||
C2H2 Zn finger | 419..439 | CDD:275368 | 4/28 (14%) | ||
C2H2 Zn finger | 447..467 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 475..495 | CDD:275368 | 1/19 (5%) | ||
C2H2 Zn finger | 503..523 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 531..551 | CDD:275368 | 1/19 (5%) | ||
C2H2 Zn finger | 559..579 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 587..607 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 615..636 | CDD:275368 | 9/20 (45%) | ||
C2H2 Zn finger | 644..664 | CDD:275368 | 8/19 (42%) | ||
C2H2 Zn finger | 676..696 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 704..722 | CDD:275368 | 3/17 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR23226 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |